RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SGMS2Q8NHU3 365 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 FAM167A-AS1Q96KT0 104 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1-17P01599 117 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 RPS20P60866 119 aaKnown RBP4.7□□□□□ -1.66
PTPRD-206ENST00000397617 LCN15Q6UWW0 184 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 DEFB125Q8N687 156 aa4.7□□□□□ -1.66
PTPRD-206ENST00000397617 IGLV11-55A0A075B6I3 123 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 A8MWL6 223 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 SCO1O75880 301 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 LOXL1Q08397 574 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 FAM78BQ5VT40 261 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 CIARTQ8N365 385 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 RPS10P5Q9NQ39 176 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 SLC25A17O43808 307 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 ATG101Q9BSB4 218 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 SRRM4A7MD48 611 aaKnown RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 SLC31A2O15432 143 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 MMP23AO75900 390 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 CDX1P47902 265 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 GAMTQ14353 236 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 MMDQ15546 238 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM183BQ1AE95 376 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 UTP20O75691 2785 aaKnown RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 COL6A5A8TX70 2615 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 TRAV39A0A0B4J263 110 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 RBAKDNA6NC62 111 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 ZFP92A6NM28 416 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 SRSF2Q01130 221 aaKnown RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 CCL3L1P16619 93 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 PKIAP61925 76 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF674Q2M3X9 581 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 PIMREGQ9BSJ6 248 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 NPFFR1Q9GZQ6 430 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1W2PPQ1 181 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 C9JQL5 133 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 TOMM40O96008 361 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 OR10J1P30954 320 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 RPL23P62829 140 aaKnown RBP4.69□□□□□ -1.66
PTPRD-206ENST00000397617 Q8WTZ3 238 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 PRR13Q9NZ81 148 aa4.69□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1B0GV72 72 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FOXE3Q13461 319 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF726P1Q15940 193 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 C10orf105Q8TEF2 133 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 UBE2L3P68036 154 aaKnown RBP4.68□□□□□ -1.66
PTPRD-206ENST00000397617 HES1Q14469 280 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 H1FXQ92522 213 aaKnown RBP4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ZDHHC16Q969W1 377 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 GNB1LQ9BYB4 327 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 HELTA6NFD8 242 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FAM223BA6NKX1 122 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 C10orf113Q5VZT2 155 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FAM223AQ8IWN6 122 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 RASL11BQ9BPW5 248 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 SHANK2-AS3Q9BTD1 123 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 MRPL27Q9P0M9 148 aaKnown RBP4.68□□□□□ -1.66
PTPRD-206ENST00000397617 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 NF1P21359 2839 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 MLST8Q9BVC4 326 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 PUS1Q9Y606 427 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FAM90A27PA6NNH2 459 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 TEX22C9J3V5 150 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 GCGP01275 180 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 RNF151Q2KHN1 245 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 LURAP1LQ8IV03 231 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FMC1Q96HJ9 113 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 C21orf62Q9NYP8 219 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 XIRP2A4UGR9 3374 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 TRBV7-1A0A0A6YYK4 115 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 IGHV3-43A0A0B4J1X8 118 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 IGHV3-43DP0DP04 118 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 OR4F5Q8NH21 305 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 OR2T6Q8NHC8 308 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 OR4F4Q96R69 305 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 FNDC4Q9H6D8 234 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ATMQ13315 3056 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ELOBQ15370 118 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 ELOVL1Q9BW60 279 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM231Q9H6L2 316 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 GOLT1BQ9Y3E0 138 aa4.68□□□□□ -1.66
PTPRD-206ENST00000397617 NBEAL1Q6ZS30 2694 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 NPIPB6E9PJ23 425 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 NBEAP1P0C6P0 100 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 CX3CL1P78423 397 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 C12orf57Q99622 126 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 CNFNQ9BYD5 112 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 SLC25A22Q9H936 323 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 MOB4Q9Y3A3 225 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 FRYQ5TBA9 3013 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 I3L2K1 104 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 SOD3P08294 240 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 HOXA5P20719 270 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 RELQ04864 619 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-206ENST00000397617 Q0VG73 95 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 ISOC2Q96AB3 205 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms