RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GATCO43716 136 aaKnown RBP6.6□□□□□ -1.35
NEDD9-203ENST00000397378 HBE1P02100 147 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 PMP2P02689 132 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 P0C879 139 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 IGLC1P0CG04 106 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 SDC2P34741 201 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 FUSP35637 526 aaKnown RBP eCLIP6.6□□□□□ -1.351e-8■■■□□ 15.2
NEDD9-203ENST00000397378 RAB14P61106 215 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-203ENST00000397378 DAD1P61803 113 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 MLANAQ16655 118 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 BSXQ3C1V8 233 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 TIGITQ495A1 244 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 GDF5OSQ5U4N7 250 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 CLVS1Q8IUQ0 354 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-203ENST00000397378 ZNF709Q8N972 641 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 OR1S2Q8NGQ3 325 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 Q8WTZ3 238 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 SSR3Q9UNL2 185 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
NEDD9-203ENST00000397378 A0A0B4J293 547 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 BUB3O43684 328 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 GSTZ1O43708 216 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-203ENST00000397378 TMEM127O75204 238 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 ATP6V1G2O95670 118 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 UCP3P55916 312 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 FXYD7P58549 80 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 MXD1Q05195 221 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 IZUMO4Q1ZYL8 232 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 RRN3P1Q2M238 152 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 AARDQ4LEZ3 155 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 IDNKQ5T6J7 187 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 GSG1LQ6UXU4 331 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 FOXI2Q6ZQN5 318 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 C1orf158Q8N1D5 194 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 ZNF680Q8NEM1 530 aa6.59□□□□□ -1.35
NEDD9-203ENST00000397378 SAV1Q9H4B6 383 aaPredicted RBP6.59□□□□□ -1.35
NEDD9-203ENST00000397378 RPS10-NUDT3A0A1W2PQS6 291 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 SNAPINO95295 136 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 IGKV1-5P01602 117 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 CLEC2LP0C7M8 214 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 HRH1P35367 487 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 CCL18P55774 89 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 TAS2R20P59543 309 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 TSPAN5P62079 268 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 DHODHQ02127 395 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 COTL1Q14019 142 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 ICAM4Q14773 271 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-203ENST00000397378 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 LYSMD2Q8IV50 215 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 PDCD10Q9BUL8 212 aa6.58□□□□□ -1.36
NEDD9-203ENST00000397378 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 IL4P05112 153 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 SLC25A4P12235 298 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PSMB9P28065 219 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 OR10J1P30954 320 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 NUP62P37198 522 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-203ENST00000397378 ID1P41134 155 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 ETV6P41212 452 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 HTR2BP41595 481 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PSMB3P49720 205 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 RND2P52198 227 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 AKR1C2P52895 323 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PAX9P55771 341 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 DEFB1P60022 68 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 GABARAPL2P60520 117 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 HAMPP81172 84 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PSG9Q00887 426 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 ZNF79Q15937 498 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PRSS54Q6PEW0 395 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 NRG4Q8WWG1 115 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 S100A16Q96FQ6 103 aaKnown RBP6.57□□□□□ -1.36
NEDD9-203ENST00000397378 C7orf50Q9BRJ6 194 aaKnown RBP6.57□□□□□ -1.36
NEDD9-203ENST00000397378 SLC35B3Q9H1N7 401 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 ENY2Q9NPA8 101 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 PGPEP1Q9NXJ5 209 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
NEDD9-203ENST00000397378 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 A8MTW9 85 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 ATG12O94817 140 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 TOMM40O96008 361 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 IFNA5P01569 189 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 HLA-DMAP28067 261 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 RORCP51449 518 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 RND3P61587 244 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 TMEM69Q5SWH9 247 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 Q6ZNX1 250 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 RNASEH2CQ8TDP1 164 aaKnown RBP6.56□□□□□ -1.36
NEDD9-203ENST00000397378 FCGR1BQ92637 280 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 LINC00052Q96N35 136 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 WDR12Q9GZL7 423 aaKnown RBP6.56□□□□□ -1.36
NEDD9-203ENST00000397378 MAGT1Q9H0U3 335 aa6.56□□□□□ -1.36
NEDD9-203ENST00000397378 SOCS3O14543 225 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 RGS13O14921 159 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 CIDEAO60543 219 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms