RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 C15orf61A6NNL5 157 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 WNT9BO14905 357 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CD5LO43866 347 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 AMY1AP04745 511 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 RAB9AP51151 201 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CRYBA4P53673 196 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 TCL1AP56279 114 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 MRGPRG-AS1Q2M3A8 158 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 SPRNQ5BIV9 151 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 MUC21Q5SSG8 566 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 UFSP1Q6NVU6 142 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 FGFRL1Q8N441 504 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 OR1L8Q8NGR8 309 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CCDC140Q96MF4 163 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 NAT8BQ9UHF3 227 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 SMPXQ9UHP9 88 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CLDN1O95832 211 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 HLA-DQA1P01909 254 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 HLA-DRB1P01911 266 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 STAG3L2P0CL84 134 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 SRIP30626 198 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 REG1BP48304 166 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 PSG9Q00887 426 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CT45A1Q5HYN5 189 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CT45A3Q8NHU0 189 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 TMEM167AQ8TBQ9 72 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 C18orf32Q8TCD1 76 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 GLMPQ8WWB7 406 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 ITLN2Q8WWU7 325 aaPredicted RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 C19orf24Q9BVV8 132 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 PRR14LQ5THK1 2151 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 DSCAMO60469 2012 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 TPRP12270 2363 aaKnown RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 VWC2LB2RUY7 222 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 APOA2P02652 100 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 SPINK2P20155 84 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 AZU1P20160 251 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 LGALS7P47929 136 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 KLF5Q13887 457 aaPredicted RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 C2orf83Q53S99 150 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 NPBQ8NG41 125 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 OR10W1Q8NGF6 305 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 TECRQ9NZ01 308 aaKnown RBP4.32□□□□□ -1.72
VPS41-203ENST00000395969 WDR83OSQ9Y284 106 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
VPS41-203ENST00000395969 USF3Q68DE3 2245 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 TRAV8-6A0A0B4J262 113 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 SMIM27A0A1W2PRY6 76 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 RRHO14718 337 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 CXorf1O96002 111 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 IGLV2-23P01705 113 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 CRYGCP07315 174 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 GRPP07492 148 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 ARL14EPLP0DKL9 152 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 AREGP15514 252 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 ZNF134P52741 427 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 RPL31P62899 125 aaKnown RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 AESQ08117 197 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 SHISA2Q6UWI4 295 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 C12orf54Q6X4T0 127 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 ZNF826PQ6ZT77 177 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 TEX45Q8NA69 505 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 OR1B1Q8NGR6 318 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 YAE1D1Q9NRH1 226 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 PRNDQ9UKY0 176 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 PPP1R3CQ9UQK1 317 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 YTHDF2Q9Y5A9 579 aaKnown RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 DNAJC13O75165 2243 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 LINC00473A8K010 186 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 HSPB6O14558 160 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 CNIH1O95406 144 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 COL8A2P25067 703 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 UBE2G1P62253 170 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 PRCDQ00LT1 54 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 TNXAQ16473 311 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 PRR30Q53SZ7 412 aaPredicted RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 RASL11AQ6T310 242 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 CACNG8Q8WXS5 425 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 AP1S3Q96PC3 154 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 COMMD5Q9GZQ3 224 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 OSTCQ9NRP0 149 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 PGPEP1Q9NXJ5 209 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms