RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 K7ERU9 68 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 HIST1H1EP10412 219 aaKnown RBP13.27□□□□□ -0.28
PHTF1-205ENST00000393357 GPR183P32249 361 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 BPIFA4PQ86YQ2 179 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 GCSAMQ8N6F7 178 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 GTSF1Q8WW33 167 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
PHTF1-205ENST00000393357 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
PHTF1-205ENST00000393357 TTTY13Q9BZ97 58 aa13.27□□□□□ -0.29
PHTF1-205ENST00000393357 THYN1Q9P016 225 aa13.27□□□□□ -0.29
PHTF1-205ENST00000393357 ASH1LQ9NR48 2969 aaKnown RBP13.27□□□□□ -0.29
PHTF1-205ENST00000393357 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
PHTF1-205ENST00000393357 MSMPQ1L6U9 139 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 EXOC3-AS1Q8N2X6 119 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 MBD6Q96DN6 1003 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 RELNP78509 3460 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 CCL3L1P16619 93 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 C18orf15Q96N68 181 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 PILRBQ9UKJ0 227 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 RTL8BQ17RB0 113 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 PNKDQ8N490 385 aa13.26□□□□□ -0.29
PHTF1-205ENST00000393357 CCL11P51671 97 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 CSTL1Q9H114 145 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 MRPL27Q9P0M9 148 aaKnown RBP13.25□□□□□ -0.29
PHTF1-205ENST00000393357 JPT1Q9UK76 154 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 KLRC4-KLRK1H3BQV0 150 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 MGST3O14880 152 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 TMEM249Q2WGJ8 235 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 FAM167A-AS1Q96KT0 104 aa13.25□□□□□ -0.29
PHTF1-205ENST00000393357 CCL8P80075 99 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 GOLT1AQ6ZVE7 132 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 OR1N2Q8NGR9 330 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 IGFBPL1Q8WX77 278 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
PHTF1-205ENST00000393357 C21orf140B9A014 251 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 GUSBP1Q15486 140 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 PPP1R35Q8TAP8 253 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 MRPL20Q9BYC9 149 aaKnown RBP13.24□□□□□ -0.29
PHTF1-205ENST00000393357 TPSG1Q9NRR2 321 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 TMEM238C9JI98 176 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 TMPRSS3P57727 454 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 ERHP84090 104 aaKnown RBP13.24□□□□□ -0.29
PHTF1-205ENST00000393357 LOXL1Q08397 574 aaPredicted RBP13.24□□□□□ -0.29
PHTF1-205ENST00000393357 SRSF6Q13247 344 aaKnown RBP13.24□□□□□ -0.29
PHTF1-205ENST00000393357 C1orf185Q5T7R7 199 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 DEFB125Q8N687 156 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 LY96Q9Y6Y9 160 aa13.24□□□□□ -0.29
PHTF1-205ENST00000393357 C9orf172C9J069 976 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 SLC25A17O43808 307 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 TMEM11P17152 192 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 LYZP61626 148 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 CD69Q07108 199 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
PHTF1-205ENST00000393357 SLC25A10Q9UBX3 287 aaPredicted RBP13.23□□□□□ -0.29
PHTF1-205ENST00000393357 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
PHTF1-205ENST00000393357 TNFSF15O95150 251 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 CYC1P08574 325 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 CT45A6P0DMU7 189 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 CT45A5P0DMU8 189 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 CT45A7P0DMV0 189 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 WDR31Q8NA23 367 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 OR1L4Q8NGR5 311 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
PHTF1-205ENST00000393357 ZNF257Q9Y2Q1 563 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
PHTF1-205ENST00000393357 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 COX19Q49B96 90 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 FAM120AOSQ5T036 256 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 PMS2CLQ68D20 193 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 FA2HQ7L5A8 372 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 WFDC12Q8WWY7 111 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 RPP21Q9H633 154 aaKnown RBP13.22□□□□□ -0.29
PHTF1-205ENST00000393357 PRNDQ9UKY0 176 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 APC2O95996 2303 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 MALRD1Q5VYJ5 2156 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 ARMS2P0C7Q2 107 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 CFHR2P36980 270 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 C17orf58Q2M2W7 97 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 DHRS13Q6UX07 377 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
PHTF1-205ENST00000393357 UPK2O00526 184 aa13.21□□□□□ -0.29
PHTF1-205ENST00000393357 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
PHTF1-205ENST00000393357 PERPQ96FX8 193 aa13.21□□□□□ -0.29
PHTF1-205ENST00000393357 ST20Q9HBF5 79 aa13.21□□□□□ -0.29
PHTF1-205ENST00000393357 FOXA2Q9Y261 457 aaPredicted RBP13.21□□□□□ -0.29
PHTF1-205ENST00000393357 LRBAP50851 2863 aa13.21□□□□□ -0.29
PHTF1-205ENST00000393357 PRCDQ00LT1 54 aa13.21□□□□□ -0.29
PHTF1-205ENST00000393357 MEF2CQ06413 473 aaPredicted RBP13.21□□□□□ -0.29
PHTF1-205ENST00000393357 PEF1Q9UBV8 284 aaKnown RBP13.21□□□□□ -0.29
PHTF1-205ENST00000393357 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
PHTF1-205ENST00000393357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms