RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TAF9BQ9HBM6 251 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 ZNF355PQ9NSJ1 428 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 CORTO00230 105 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 ATP6V0CP27449 155 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 SRIP30626 198 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 LDLRAD2Q5SZI1 272 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 AMTNQ6UX39 209 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 DPPA3Q6W0C5 159 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 OR2T10Q8NGZ9 312 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 TMEM222Q9H0R3 208 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 NAT8BQ9UHF3 227 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 F11RQ9Y624 299 aaKnown RBP2.71□□□□□ -1.98
XRN1-202ENST00000392981 SCN7AQ01118 1682 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 ASH1LQ9NR48 2969 aaKnown RBP2.71□□□□□ -1.98
XRN1-202ENST00000392981 CACNA1FO60840 1977 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 C9JAW5 83 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 AMBPP02760 352 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 HINT1P49773 126 aaPredicted RBP2.71□□□□□ -1.98
XRN1-202ENST00000392981 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 RMI2Q96E14 147 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 TEX37Q96LM6 180 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 NRIP2Q9BQI9 281 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 TTTY10Q9BZA0 68 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 CBLN4Q9NTU7 201 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 TNFSF18Q9UNG2 199 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 HIGD1AQ9Y241 93 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 ROBO3Q96MS0 1386 aa2.71□□□□□ -1.98
XRN1-202ENST00000392981 COL11A2P13942 1736 aaPredicted RBP2.71□□□□□ -1.98
XRN1-202ENST00000392981 NKX2-6A6NCS4 301 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 KLF7O75840 302 aaPredicted RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 DNAL4O96015 105 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR5AC1P0C628 307 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 RTL8BQ17RB0 113 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 AADACL3Q5VUY0 350 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 FKBP1CQ5VVH2 108 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 Q6ZS49 121 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 SCXQ7RTU7 201 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR5A1Q8NGJ0 315 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR5AK2Q8NH90 309 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 RTN4IP1Q8WWV3 396 aaPredicted RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 RTL8AQ9BWD3 113 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 IGHV3OR16-10A0A075B7F0 116 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 KRTAP16-1A8MUX0 517 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OPN1SWP03999 348 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 C1QTNF8P60827 252 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 FHL1Q13642 323 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 MORN2Q502X0 79 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 BANF2Q9H503 90 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 TAAR3PQ9P1P4 343 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 PTPRJQ12913 1337 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 LOC285095A0A1B0GVY8 99 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 SYNGR2O43760 224 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 EPPINO95925 133 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 DHRS2Q13268 280 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 EIF3IQ13347 325 aaKnown RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 PRR30Q53SZ7 412 aaPredicted RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 C11orf53Q8IXP5 236 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 DEFB106AQ8N104 65 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 C14orf178Q8N769 122 aaPredicted RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR11G2Q8NGC1 345 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR10P1Q8NGE3 313 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 RPS4Y2Q8TD47 263 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 MS4A6EQ96DS6 147 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 C16orf74Q96GX8 76 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 CHST6Q9GZX3 395 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 JPT1Q9UK76 154 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 LRRK1Q38SD2 2015 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 EDC4Q6P2E9 1401 aaKnown RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 IL5P05113 134 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 DEFA4P12838 97 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 MRPS21P82921 87 aaKnown RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 CST6Q15828 149 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 ZNF141Q15928 474 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 C12orf74Q32Q52 190 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 FAAP20Q6NZ36 180 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 Q6Q795 121 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 SLC35E3Q7Z769 313 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 MKXQ8IYA7 352 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 HIST3H2BBQ8N257 126 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 OR5W2Q8NH69 310 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 MRPL30Q8TCC3 161 aaKnown RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 IFI27L2Q9H2X8 130 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 ZNF443Q9Y2A4 671 aaPredicted RBP2.7□□□□□ -1.98
XRN1-202ENST00000392981 MYH10P35580 1976 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 ARAP2Q8WZ64 1704 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 SBF1O95248 1867 aa2.7□□□□□ -1.98
XRN1-202ENST00000392981 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 GCM2O75603 506 aaPredicted RBP2.69□□□□□ -1.98
XRN1-202ENST00000392981 RPS24P62847 133 aaKnown RBP2.69□□□□□ -1.98
XRN1-202ENST00000392981 KHDC3LQ587J8 217 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 MRPL2Q5T653 305 aaKnown RBP2.69□□□□□ -1.98
XRN1-202ENST00000392981 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 MARCH3Q86UD3 253 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 C20orf203Q8NBC4 194 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 OR4B1Q8NGF8 309 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 OR4C16Q8NGL9 310 aa2.69□□□□□ -1.98
XRN1-202ENST00000392981 SGMS2Q8NHU3 365 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms