RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DPPA3Q6W0C5 159 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 SLC45A2Q9UMX9 530 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 IGKV1D-37A0A075B6S9 117 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 G3V318 75 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 I3L2K1 104 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 CRYGCP07315 174 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 LINC00869P0C866 280 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 RAB31Q13636 194 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 SOHLH1Q5JUK2 328 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 SLC39A9Q9NUM3 307 aa9.6□□□□□ -0.87
SPTBN1-203ENST00000389980 FLNBO75369 2602 aaKnown RBP9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 MTORP42345 2549 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 MAP1LC3B2A6NCE7 125 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 HBE1P02100 147 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 NUTF2P61970 127 aaKnown RBP9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 PRR20EP86478 221 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 PRR20CP86479 221 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 PRR20DP86480 221 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 PRR20BP86481 221 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 PRR20AP86496 221 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 ACOT6Q3I5F7 207 aaPredicted RBP9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 CYB561D1Q8N8Q1 229 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 SGMS2Q8NHU3 365 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 CUBNO60494 3623 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 NF1P21359 2839 aa9.59□□□□□ -0.87
SPTBN1-203ENST00000389980 NPIPB5A8MRT5 1133 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 B4DEV8 164 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 K7EIM0 57 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 CORTO00230 105 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 MBP02144 154 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 RPL29P47914 159 aaKnown RBP9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 BLCAPP62952 87 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 ETFRF1Q6IPR1 90 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 Q6ZS46 218 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 ZNF48Q96MX3 618 aaPredicted RBP9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 BPIFB3P59826 476 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 MBD3L1Q8WWY6 194 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 NDUFAF3Q9BU61 184 aa9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 ACTR3CQ9C0K3 210 aaPredicted RBP9.58□□□□□ -0.88
SPTBN1-203ENST00000389980 IGLV11-55A0A075B6I3 123 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 LOC102723971A0A1B0GUV8 181 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 OR2J3O76001 311 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 IER3P46695 156 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 CDC34P49427 236 aaPredicted RBP9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 CYP2G1PQ6ZSU1 146 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 THAP8Q8NA92 274 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 TMEM116Q8NCL8 245 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 SEPSECSQ9HD40 501 aaKnown RBP9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 TRAV1-1A0A0B4J248 108 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 CTXND1A0A1B0GTU2 59 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 A8MWP6 167 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 CYB5BO43169 146 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 KCNIP2Q9NS61 270 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
SPTBN1-203ENST00000389980 A0A1W2PPV4 95 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 TCRBV4S1A1TA0A5B7 111 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 NDUFB8O95169 186 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 ZNF674Q2M3X9 581 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 SPNS3Q6ZMD2 512 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 ZNF355PQ9NSJ1 428 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 PITPNC1Q9UKF7 332 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 H3BQ15 152 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 SOX15O60248 233 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 HSPB1P04792 205 aaKnown RBP9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 BCL2P10415 239 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 ELOBQ15370 118 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 ANKRD39Q53RE8 183 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 C9orf139Q6ZV77 190 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 OR1L6Q8NGR2 347 aa9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 FAM110DQ8TAY7 271 aaPredicted RBP9.56□□□□□ -0.88
SPTBN1-203ENST00000389980 KHDC3LQ587J8 217 aa9.55□□□□□ -0.88
SPTBN1-203ENST00000389980 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms