RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SPSB3Q6PJ21 355 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 MED13LQ71F56 2210 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 PRCDQ00LT1 54 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 ZNF250P15622 560 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 DTX1Q86Y01 620 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 OR1P1Q8NH06 330 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 FAM131CQ96AQ9 280 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 TBX6O95947 436 aaPredicted RBP12.26□□□□□ -0.45
LRRK1-201ENST00000388948 CRYGSP22914 178 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 FCN3O75636 299 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 DEFB130BP0DP73 79 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 DEFB130AP0DP74 79 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 C5orf64Q2M2E5 130 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 C10orf55Q5SWW7 151 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 BUB1B-PAK6H3BSN5 160 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 TCF21O43680 179 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 CD28P10747 220 aa12.26□□□□□ -0.45
LRRK1-201ENST00000388948 TRAF4Q9BUZ4 470 aaPredicted RBP12.26□□□□□ -0.45
LRRK1-201ENST00000388948 GAGE10A6NGK3 116 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 GHRHP01286 108 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 ATP5G3P48201 142 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 PYYP10082 97 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 PEF1Q9UBV8 284 aaKnown RBP12.25□□□□□ -0.45
LRRK1-201ENST00000388948 NBL1P41271 181 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 C11orf91Q3C1V1 193 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 TDGF1P3P51864 188 aa12.25□□□□□ -0.45
LRRK1-201ENST00000388948 KLF17Q5JT82 389 aaPredicted RBP12.25□□□□□ -0.45
LRRK1-201ENST00000388948 IGHG3P01860 377 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 TRAV12-3A0A0B4J271 114 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 LYPD2Q6UXB3 125 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 FAM89BQ8N5H3 189 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 PRSS33Q8NF86 280 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
LRRK1-201ENST00000388948 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 CD55P08174 381 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 PSG8Q9UQ74 426 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 SRRM4A7MD48 611 aaKnown RBP12.24□□□□□ -0.45
LRRK1-201ENST00000388948 EFNA2O43921 213 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 FBLIM1Q8WUP2 373 aa12.24□□□□□ -0.45
LRRK1-201ENST00000388948 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
LRRK1-201ENST00000388948 INSP01308 110 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 ZNF319Q9P2F9 582 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 A0A1B0GW15 77 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 TNFSF13O75888 250 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 VENTXO95231 258 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
LRRK1-201ENST00000388948 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
LRRK1-201ENST00000388948 PKIAP61925 76 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 SLC25A48Q6ZT89 311 aaKnown RBP12.23□□□□□ -0.45
LRRK1-201ENST00000388948 TMEM155Q4W5P6 130 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 CD177Q8N6Q3 437 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 COL5A1-AS1Q5SY13 56 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 IL17RELQ6ZVW7 336 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 NABP1Q96AH0 204 aa12.23□□□□□ -0.45
LRRK1-201ENST00000388948 CXorf65A6NEN9 183 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 NPIPB5A8MRT5 1133 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 TMEM86BQ8N661 226 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 MRAPQ8TCY5 172 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 EREGO14944 169 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 LCN12Q6JVE5 192 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 TCF23Q7RTU1 214 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 IL36BQ9NZH7 164 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 CDK2AP2O75956 126 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 IGFBP3P17936 291 aaPredicted RBP12.22□□□□□ -0.45
LRRK1-201ENST00000388948 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 CST9LQ9H4G1 147 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 PMS2P5A8MQ11 134 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
LRRK1-201ENST00000388948 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.45
LRRK1-201ENST00000388948 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-201ENST00000388948 IGKV2-40A0A087WW87 121 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-201ENST00000388948 IGKV2D-40P01614 121 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-201ENST00000388948 CCL1P22362 96 aa12.21□□□□□ -0.45
LRRK1-201ENST00000388948 MPTX1A8MV57 137 aa12.21□□□□□ -0.45
LRRK1-201ENST00000388948 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-201ENST00000388948 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-201ENST00000388948 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.45
LRRK1-201ENST00000388948 LINC00158P58513 81 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 GAFA1Q96PS6 74 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 EVI2AP22794 236 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 RNF5Q99942 180 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 PRB1P04280 392 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 RNF182Q8N6D2 247 aa12.21□□□□□ -0.46
LRRK1-201ENST00000388948 VWA8A3KMH1 1905 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 F5H768 121 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 NMBP08949 121 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 APOMO95445 188 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 CGB3P0DN86 165 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 PSG1P11464 419 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms