RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 OR5T1Q8NG75 326 aa13.24□□□□□ -0.29
HLA-A-202ENST00000376806 FXYD5Q96DB9 178 aa13.24□□□□□ -0.29
HLA-A-202ENST00000376806 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
HLA-A-202ENST00000376806 PGPEP1LA6NFU8 196 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 SLC25A16P16260 332 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 LYZP61626 148 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 C2CD4CQ8TF44 421 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 FABP1P07148 127 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 CLEC12BQ2HXU8 276 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 BRD3OSQ6XYD6 125 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
HLA-A-202ENST00000376806 ZNF48Q96MX3 618 aaPredicted RBP13.23□□□□□ -0.29
HLA-A-202ENST00000376806 AURKAIP1Q9NWT8 199 aaPredicted RBP13.23□□□□□ -0.29
HLA-A-202ENST00000376806 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 C9JCJ5 164 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 IGHV4-38-2P0DP08 117 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 CRYBB3P26998 211 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 RPL35P42766 123 aaKnown RBP13.22□□□□□ -0.29
HLA-A-202ENST00000376806 RPS10P46783 165 aaKnown RBP13.22□□□□□ -0.29
HLA-A-202ENST00000376806 C1QL4Q86Z23 238 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 ABCA1O95477 2261 aa13.22□□□□□ -0.29
HLA-A-202ENST00000376806 CSMD1Q96PZ7 3565 aa13.21□□□□□ -0.29
HLA-A-202ENST00000376806 CD99P14209 185 aa13.21□□□□□ -0.29
HLA-A-202ENST00000376806 SUMO1P63165 101 aaKnown RBP13.21□□□□□ -0.29
HLA-A-202ENST00000376806 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
HLA-A-202ENST00000376806 S4R3C0 116 aa13.21□□□□□ -0.29
HLA-A-202ENST00000376806 A0A0U1RQK1 487 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 B4DSR2 109 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 ATP6V0E1O15342 81 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 TOMM40O96008 361 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 RD3LP0DJH9 198 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 GP9P14770 177 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 GALR1P47211 349 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 MFAP4P55083 255 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 C5orf56Q8N8D9 126 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 NECAP1Q8NC96 275 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.3
HLA-A-202ENST00000376806 OR5B12Q96R08 314 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 ELOVL1Q9BW60 279 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 C7orf69Q9H7B7 122 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 THYN1Q9P016 225 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 LY96Q9Y6Y9 160 aa13.21□□□□□ -0.3
HLA-A-202ENST00000376806 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 GNG7O60262 68 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 NDUFB8O95169 186 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
HLA-A-202ENST00000376806 FAM210BQ96KR6 192 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 BIN3Q9NQY0 253 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
HLA-A-202ENST00000376806 F8W735 103 aaPredicted RBP13.19□□□□□ -0.3
HLA-A-202ENST00000376806 OR2J3O76001 311 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 HNF1AP20823 631 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 UNQ5815/PRO19632Q6UWF5 114 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 ZNF329Q86UD4 541 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 OCC1Q8TAD7 63 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 SFRP2Q96HF1 295 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
HLA-A-202ENST00000376806 SAV1Q9H4B6 383 aaPredicted RBP13.19□□□□□ -0.3
HLA-A-202ENST00000376806 HIF1ANQ9NWT6 349 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 ITPR2Q14571 2701 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 HELTA6NFD8 242 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 S100PP25815 95 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 Q56UQ5 140 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
HLA-A-202ENST00000376806 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
HLA-A-202ENST00000376806 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
HLA-A-202ENST00000376806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-A-202ENST00000376806 A0A096LNT2 108 aa13.18□□□□□ -0.3
HLA-A-202ENST00000376806 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
HLA-A-202ENST00000376806 K7EN84 100 aa13.18□□□□□ -0.3
HLA-A-202ENST00000376806 HIST1H1BP16401 226 aaKnown RBP13.18□□□□□ -0.3
HLA-A-202ENST00000376806 YPEL3P61236 119 aaPredicted RBP13.18□□□□□ -0.3
HLA-A-202ENST00000376806 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
HLA-A-202ENST00000376806 IL4P05112 153 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
HLA-A-202ENST00000376806 MYCNOSP40205 109 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 GNG4P50150 75 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 RNF125Q96EQ8 232 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 PYGO2Q9BRQ0 406 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 FBXL7Q9UJT9 491 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 VPS13CQ709C8 3753 aa13.17□□□□□ -0.3
HLA-A-202ENST00000376806 WI2-2373I1.2A0A1W2PRP0 233 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 H3BRN7 92 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms