RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TIGITQ495A1 244 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 TMEM183AQ8IXX5 376 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 CFHR4Q92496 578 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 V9GYV3 84 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 TOX4O94842 621 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 MRPL41Q8IXM3 137 aaKnown RBP12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 NBR2O15453 112 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 PSG1P11464 419 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 LPAR2Q9HBW0 351 aa12.69□□□□□ -0.38
CNKSR1-202ENST00000374253 AMBPP02760 352 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 PRTN3P24158 256 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 ADMP35318 185 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 DTX2Q86UW9 622 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 ITLN2Q8WWU7 325 aaPredicted RBP12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 RNF2Q99496 336 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 ISLRO14498 428 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 HYPMO75409 117 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 IER3P46695 156 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 IGF2BP2-AS1Q96M15 143 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 TRGV9Q99603 122 aa12.68□□□□□ -0.38
CNKSR1-202ENST00000374253 I3L2K1 104 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 CNN1P51911 297 aaKnown RBP12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 RPEL1Q2QD12 228 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 PVRIGQ6DKI7 326 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 FAM168AQ92567 244 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 PERPQ96FX8 193 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 IGLC1P0CG04 106 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
CNKSR1-202ENST00000374253 PGPA6NDG6 321 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 PEX7O00628 323 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 OR1L6Q8NGR2 347 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 M0R1W7 72 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 NUPR1O60356 82 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 SLC25A5P05141 298 aaKnown RBP12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 CEACAM3P40198 252 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 NDPQ00604 133 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
CNKSR1-202ENST00000374253 IGHV3-23P01764 117 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 HOXB4P17483 251 aaPredicted RBP12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 RASL11BQ9BPW5 248 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 CENPEQ02224 2701 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 K7EIM0 57 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 CORTO00230 105 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 GCGP01275 180 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 NBEAP1P0C6P0 100 aa12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 HIST1H1BP16401 226 aaKnown RBP12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
CNKSR1-202ENST00000374253 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 BAGE2Q86Y30 109 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 RBM14Q96PK6 669 aaKnown RBP12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 MRPL18Q9H0U6 180 aaKnown RBP12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 SNURFLB1AK76 121 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 HIGD1AQ9Y241 93 aa12.64□□□□□ -0.39
CNKSR1-202ENST00000374253 GP9P14770 177 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 RAB4BP61018 213 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 CX3CL1P78423 397 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 C9orf152Q5JTZ5 239 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 FAM120AOSQ5T036 256 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 ZNF600Q6ZNG1 722 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 Q71RC1 249 aaPredicted RBP12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 BTF3L4Q96K17 158 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 ASCL2Q99929 193 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 RNF5Q99942 180 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 S100A12P80511 92 aa12.63□□□□□ -0.39
CNKSR1-202ENST00000374253 F2Z2F3 143 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 EXOC3-AS1Q8N2X6 119 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 SLC25A39Q9BZJ4 359 aaPredicted RBP12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 EPDR1Q9UM22 224 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 SH2D7A6NKC9 451 aaPredicted RBP12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 A6NNC1 897 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 NDUFA3O95167 84 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 MYCNOSP40205 109 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 COA6Q5JTJ3 125 aaKnown RBP12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 NPBQ8NG41 125 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
CNKSR1-202ENST00000374253 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 PDLIM4P50479 330 aa12.61□□□□□ -0.39
CNKSR1-202ENST00000374253 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms