RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CD99P14209 185 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 HIVEP2P31629 2446 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 P2RY1P47900 373 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 TAS2R60P59551 318 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SEC61BP60468 96 aaKnown RBP2.78□□□□□ -1.96
MCF2-202ENST00000370573 GNB1P62873 340 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 HERV-K104P63124 156 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 NDPQ00604 133 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 PRCDQ00LT1 54 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 WT1-ASQ06250 92 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 ARL16Q0P5N6 197 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 TNXAQ16473 311 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 FAM159AQ6UWV7 190 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 Q71RC1 249 aaPredicted RBP2.78□□□□□ -1.96
MCF2-202ENST00000370573 TMEM252Q8N6L7 170 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 KLHDC1Q8N7A1 406 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SIGLECL1Q8N7X8 197 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 OR1L8Q8NGR8 309 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 DTD1Q8TEA8 209 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 RAB40CQ96S21 281 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 HSPB9Q9BQS6 159 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SLC25A33Q9BSK2 321 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 HINT2Q9BX68 163 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 MFFQ9GZY8 342 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SAV1Q9H4B6 383 aaPredicted RBP2.78□□□□□ -1.96
MCF2-202ENST00000370573 WFDC1Q9HC57 220 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 ZFP57Q9NU63 452 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 PSENENQ9NZ42 101 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 FBXO7Q9Y3I1 522 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
MCF2-202ENST00000370573 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 RPS10-NUDT3A0A1W2PQS6 291 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 IGLC7A0M8Q6 106 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 C15orf62A8K5M9 175 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 PMS2P5A8MQ11 134 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 H3BP45 60 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 MED6O75586 246 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 CST7O76096 145 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 FGF2P09038 288 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 APELAP0DMC3 54 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 RPL12P30050 165 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 MAS1LP35410 378 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 SRP14P37108 136 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 TAS2R30P59541 319 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 CX3CL1P78423 397 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 EWSR1Q01844 656 aaKnown RBP eCLIP2.77□□□□□ -1.97
MCF2-202ENST00000370573 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 BTN1A1Q13410 526 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 FXYD3Q14802 87 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 PLGLAQ15195 96 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 SPANXN5Q5MJ07 72 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 TMEM14EPQ6UXP3 125 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 ZNF562Q6V9R5 426 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 C19orf35Q6ZS72 473 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 ACOT7LQ6ZUV0 252 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 TMUB2Q71RG4 321 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 KCNRGQ8N5I3 272 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 C5orf56Q8N8D9 126 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 OR5B3Q8NH48 314 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 AQP10Q96PS8 301 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 ALKBH7Q9BT30 221 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 COMMD5Q9GZQ3 224 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 CYTL1Q9NRR1 136 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 TNFRSF19Q9NS68 423 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 LYRM2Q9NU23 88 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 FKBP11Q9NYL4 201 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 HSPB11Q9Y547 144 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 WSB1Q9Y6I7 421 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 F8P00451 2351 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 MAST4O15021 2626 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 INS-IGF2F8WCM5 200 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 HLA-DRB1P01911 266 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 REG1AP05451 166 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 METTL15P1P0C7V9 234 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 PET100P0DJ07 73 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 OR13C7P0DN81 318 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 RNASE2P10153 161 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 FOLR2P14207 255 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 PVALBP20472 110 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 FCGR2BP31994 310 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 RPL27AP46776 148 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 CAV2P51636 162 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 MFAP2P55001 183 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 RPL23AP62750 156 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 BLCAPP62952 87 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 DEFA6Q01524 100 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 OPCMLQ14982 345 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 BSXQ3C1V8 233 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 UQCC3Q6UW78 93 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 INO80EQ8NBZ0 244 aaPredicted RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 SRSF12Q8WXF0 261 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 DUX5Q96PT3 197 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 RASL11BQ9BPW5 248 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 FAM103A1Q9BTL3 118 aaKnown RBP2.77□□□□□ -1.97
MCF2-202ENST00000370573 SMIM3Q9BZL3 60 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 PLEKHA3Q9HB20 300 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
MCF2-202ENST00000370573 FN1P02751 2386 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms