RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 I3L2K1 104 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 K7EN84 100 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 SCGB2A1O75556 95 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 GCGP01275 180 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 EBI3Q14213 229 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 FXYD5Q96DB9 178 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 AURKAIP1Q9NWT8 199 aaPredicted RBP11.15□□□□□ -0.63
USF1-202ENST00000368020 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.63
USF1-202ENST00000368020 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.63
USF1-202ENST00000368020 TACC2O95359 2948 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 CELSR2Q9HCU4 2923 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 ORM2P19652 201 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 PDLIM4P50479 330 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 FXYD3Q14802 87 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 CCL19Q99731 98 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 WNT10AQ9GZT5 417 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
USF1-202ENST00000368020 NAV2Q8IVL1 2488 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 PEX7O00628 323 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 PAX1P15863 534 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
USF1-202ENST00000368020 CDKN1AP38936 164 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 PRB3Q04118 309 aaPredicted RBP11.13□□□□□ -0.63
USF1-202ENST00000368020 HES1Q14469 280 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 MORN5Q5VZ52 161 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 ZNF48Q96MX3 618 aaPredicted RBP11.13□□□□□ -0.63
USF1-202ENST00000368020 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 C1RLQ9NZP8 487 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
USF1-202ENST00000368020 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 PCP4L1A6NKN8 68 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 FCN1O00602 326 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
USF1-202ENST00000368020 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
USF1-202ENST00000368020 KLRD1Q13241 179 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 NIT2Q9NQR4 276 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 THYN1Q9P016 225 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 V9GYV3 84 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 UNC79Q9P2D8 2635 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 POLQO75417 2590 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 MT-ND6P03923 174 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 NBEAP1P0C6P0 100 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 PYYP10082 97 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 HNF1AP20823 631 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 MYCNOSP40205 109 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 UBE2E1P51965 193 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 Q8N6K4 173 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 ARPC1AQ92747 370 aa11.12□□□□□ -0.63
USF1-202ENST00000368020 RBM14Q96PK6 669 aaKnown RBP11.12□□□□□ -0.63
USF1-202ENST00000368020 ANKRD17O75179 2603 aaKnown RBP11.11□□□□□ -0.63
USF1-202ENST00000368020 TOX4O94842 621 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 RD3LP0DJH9 198 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 APELAP0DMC3 54 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 BRS3P32247 399 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 IBA57Q5T440 356 aaKnown RBP11.11□□□□□ -0.63
USF1-202ENST00000368020 WDR73Q6P4I2 378 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 GPR61Q9BZJ8 451 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
USF1-202ENST00000368020 APCP25054 2843 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 K7EIM0 57 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 PSG1P11464 419 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 GP9P14770 177 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
USF1-202ENST00000368020 S100A7P31151 101 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 UBE2G1P62253 170 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 TMEM183BQ1AE95 376 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
USF1-202ENST00000368020 TOMM40O96008 361 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 FABP4P15090 132 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 TMEM11P17152 192 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 ZFP36P26651 326 aaKnown RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 LYZP61626 148 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
USF1-202ENST00000368020 ATG101Q9BSB4 218 aa11.09□□□□□ -0.63
USF1-202ENST00000368020 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms