RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 MRPL32Q9BYC8 188 aaKnown RBP2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 TMEM126AQ9H061 195 aa2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 FAM107BQ9H098 131 aa2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 NDUFB11Q9NX14 153 aa2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 NHP2Q9NX24 153 aaKnown RBP2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 SEC16AO15027 2179 aa2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 PRRC2AP48634 2157 aaKnown RBP2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 CACNA1DQ01668 2161 aa2.03□□□□□ -2.08
RNU6-1249P-201ENST00000363237 SBF1O95248 1867 aa2.03□□□□□ -2.09
RNU6-1249P-201ENST00000363237 N4BP2Q86UW6 1770 aaPredicted RBP2.03□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RIMBP3CA6NJZ7 1639 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RIMBP3BA6NNM3 1639 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RIMBP3Q9UFD9 1639 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SLIT2O94813 1529 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SCAF11Q99590 1463 aaKnown RBP2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MALRD1Q5VYJ5 2156 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRAPPC8Q9Y2L5 1435 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 IGLV10-54A0A075B6I4 117 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRAV5A0A0B4J249 113 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 IGKV2-24A0A0C4DH68 120 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR51F1A6NGY5 319 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 H7BYZ3 331 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OVOL1O14753 267 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CST7O76096 145 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RHOGP84095 191 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PSG9Q00887 426 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MYL5Q02045 173 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR2T10Q8NGZ9 312 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CARD19Q96LW7 228 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ADAT1Q9BUB4 502 aaKnown RBP2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 POPDC3Q9HBV1 291 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRPM1Q7Z4N2 1603 aa2.02□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TAF1LQ8IZX4 1826 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 MUC21A0A140T8X8 626 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 GABARAPH6UMI1 98 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SDCBPO00560 298 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NDUFB3O43676 98 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 IGLV3-19P01714 112 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CLPSP04118 112 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 DEFA4P12838 97 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FKBP2P26885 142 aaKnown RBP2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ERHP84090 104 aaKnown RBP2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HRCT1Q6UXD1 115 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TMEM229BQ8NBD8 167 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR4E2Q8NGC2 313 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TVP23CQ96ET8 276 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR2H1Q9GZK4 316 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TCEAL2Q9H3H9 227 aaPredicted RBP2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRAPPC2LQ9UL33 140 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CEP164Q9UPV0 1460 aa2.01□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PTPRBP23467 1997 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TMEM189A5PLL7 270 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HLA-EP13747 358 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RPL35P42766 123 aaKnown RBP2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HINT1P49773 126 aaPredicted RBP2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 KRTAP10-3P60369 221 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CKS1BP61024 79 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TMEM258P61165 79 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SMIM21Q3B7S5 101 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CCDC58Q4VC31 144 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 EIF5AL1Q6IS14 154 aaKnown RBP2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 LCN15Q6UWW0 184 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 AAED1Q7RTV5 226 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PDZD9Q8IXQ8 264 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OR8I2Q8N0Y5 310 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 WFDC11Q8NEX6 87 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 LINC00467Q9BRT7 94 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PRADC1Q9BSG0 188 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NPCDR1Q9BY65 106 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OTORQ9NRC9 128 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NAT8BQ9UHF3 227 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 BAIAP2Q9UQB8 552 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 CCL26Q9Y258 94 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FER1L6Q2WGJ9 1857 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 OVOS2A0A0G2JMS6 1433 aa2□□□□□ -2.09
RNU6-1249P-201ENST00000363237 A0A1B0GVG6 124 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ODAMA1E959 279 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RFPL4AA6NLU0 287 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HMSDA8MTL9 139 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 RFPL4AL1F8VTS6 287 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HIST1H2BKO60814 126 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 IFNA4P05014 189 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HIST1H2BJP06899 126 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 P0DMU3 169 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FAM231AP0DMU4 169 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 FAM231CP0DMU5 169 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SDC2P34741 201 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 AKR1C3P42330 323 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 TMBIM6P55061 237 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 ARPP19P56211 112 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 NDUFA6P56556 154 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 HBBP68871 147 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PSPHP78330 225 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 PHF5AQ7RTV0 110 aaKnown RBP1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 SLC30A7Q8NEW0 376 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 AQP3Q92482 292 aa1.99□□□□□ -2.09
RNU6-1249P-201ENST00000363237 LXNQ9BS40 222 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms