RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 CACNG8Q8WXS5 425 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
CHD3-202ENST00000358181 TEX22C9J3V5 150 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 NANOS3P60323 173 aaKnown RBP8.12□□□□□ -1.11
CHD3-202ENST00000358181 Q0VFX4 171 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 Q6ZQT7 251 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 TMEM144Q7Z5S9 345 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 EFNA2O43921 213 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 IGKV1D-12P01611 117 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 TIRAPP58753 221 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 TEX38Q6PEX7 206 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 NIT1Q86X76 327 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 TMEM158Q8WZ71 300 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 HEATR5BQ9P2D3 2071 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 GCM2O75603 506 aaPredicted RBP8.12□□□□□ -1.11
CHD3-202ENST00000358181 PTGDSP41222 190 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 AMELYQ99218 206 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 ZNF318Q5VUA4 2279 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 CRLF1O75462 422 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 V9GYH0 126 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 ABCA7Q8IZY2 2146 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 TRAV12-2A0A075B6T6 113 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 EGR2P11161 476 aaPredicted RBP8.12□□□□□ -1.11
CHD3-202ENST00000358181 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
CHD3-202ENST00000358181 KLK9Q9UKQ9 250 aa8.12□□□□□ -1.11
CHD3-202ENST00000358181 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
CHD3-202ENST00000358181 FOXG1P55316 489 aaPredicted RBP8.11□□□□□ -1.11
CHD3-202ENST00000358181 SAP25Q8TEE9 199 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 LCN12Q6JVE5 192 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 ATP5G3P48201 142 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 DEFB131AP59861 70 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 DMKNQ6E0U4 476 aaPredicted RBP8.11□□□□□ -1.11
CHD3-202ENST00000358181 RNF125Q96EQ8 232 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 CABIN1Q9Y6J0 2220 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 CXCL2P19875 107 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 LAGE3Q14657 143 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 PYYP10082 97 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 NBL1P41271 181 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 UBE2AP49459 152 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 HMGA2P52926 109 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 TMEM258P61165 79 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 THSD7AQ9UPZ6 1657 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 DKK1O94907 266 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 CSTL1Q9H114 145 aa8.11□□□□□ -1.11
CHD3-202ENST00000358181 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 MLNRO43193 412 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 CD5P06127 495 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 NGFRP08138 427 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 AZU1P20160 251 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 IGHV1-2P23083 117 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 OTORQ9NRC9 128 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 C17orf98A8MV24 154 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 SERF1AO75920 110 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 Q6ZT83 130 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 MIXL1Q9H2W2 232 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 SBF2Q86WG5 1849 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 A0A0G2JMM0 328 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 A0A1W2PPB8 328 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 A0A1W2PRS3 328 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 KIR3DP1A8MWS1 328 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 F8W735 103 aaPredicted RBP8.1□□□□□ -1.11
CHD3-202ENST00000358181 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 IFITM2Q01629 132 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 C15orf53Q8NAA6 179 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 C9orf106Q8NAJ2 232 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 OVOL1O14753 267 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 RPL23P62829 140 aaKnown RBP8.1□□□□□ -1.11
CHD3-202ENST00000358181 PSG7Q13046 419 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 SPATA25Q9BR10 227 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 SAA2-SAA4A0A096LPE2 208 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 IGKV1-5P01602 117 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 SAA2P0DJI9 122 aaPredicted RBP8.1□□□□□ -1.11
CHD3-202ENST00000358181 J3QKU1 62 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 CIARTQ8N365 385 aaPredicted RBP8.1□□□□□ -1.11
CHD3-202ENST00000358181 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
CHD3-202ENST00000358181 UCP3P55916 312 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 MPV17L2Q567V2 206 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 MGST2Q99735 147 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A20PA6NIJ5 464 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.09□□□□□ -1.11
CHD3-202ENST00000358181 RIPPLY2Q5TAB7 128 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 RNF183Q96D59 192 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 PKIBQ9C010 78 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 B4DSR2 109 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 C1orf43Q9BWL3 253 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms