RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 RNASE7Q9H1E1 156 aaKnown RBP18.39■□□□□ 0.54
CLPTM1-201ENST00000337392 FBN2P35556 2912 aa18.39■□□□□ 0.53
CLPTM1-201ENST00000337392 HIST3H2BBQ8N257 126 aa18.39■□□□□ 0.53
CLPTM1-201ENST00000337392 INS-IGF2F8WCM5 200 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 GNG5P63218 68 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 DPM3Q9P2X0 92 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 MDFIC2A0A1B0GVS7 189 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 ZNF25P17030 456 aaPredicted RBP18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 SLC35B1P78383 322 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 ANAPC16Q96DE5 110 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 NDUFAF3Q9BU61 184 aa18.38■□□□□ 0.53
CLPTM1-201ENST00000337392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.38■□□□□ 0.536e-8■■■■□ 21.3
CLPTM1-201ENST00000337392 ZNF320A2RRD8 509 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 CFHR4Q92496 578 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 EAF1Q96JC9 268 aaPredicted RBP18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 FSTL3O95633 263 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 DTX2Q86UW9 622 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 PYGO2Q9BRQ0 406 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 WNT10AQ9GZT5 417 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 SRD5A3Q9H8P0 318 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 RPH3ALQ9UNE2 315 aa18.37■□□□□ 0.53
CLPTM1-201ENST00000337392 RANP62826 216 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 BPESC1Q9GZL8 116 aa18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 HELTA6NFD8 242 aa18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 TOX4O94842 621 aa18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 FABP4P15090 132 aa18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 CA1P00915 261 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 NEU4Q8WWR8 484 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 TMEM167BQ9NRX6 74 aa18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 F11RQ9Y624 299 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-201ENST00000337392 PRR31Q5SQ13 230 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 PAXXQ9BUH6 204 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 AMMECR1Q9Y4X0 333 aaPredicted RBP18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 NCBP2LA6PVI3 153 aaKnown RBP18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 ATP5IP56385 69 aaPredicted RBP18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 TAS2R45P59539 299 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 NDPQ00604 133 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 THAP8Q8NA92 274 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 IMMP2LQ96T52 175 aa18.35■□□□□ 0.53
CLPTM1-201ENST00000337392 GGCTO75223 188 aaKnown RBP18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 MGST1P10620 155 aaKnown RBP18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 TCL1AP56279 114 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 OR11H6Q8NGC7 330 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 OR10G8Q8NGN5 311 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 CSPG4Q6UVK1 2322 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 NBPF19A0A087WUL8 3843 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 IGHV3-23P01764 117 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 RBP4P02753 201 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 GNG4P50150 75 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 ERVFC1-1P60608 527 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 BCL6BQ8N143 479 aaPredicted RBP18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 OR1P1Q8NH06 330 aa18.34■□□□□ 0.53
CLPTM1-201ENST00000337392 SH2D7A6NKC9 451 aaPredicted RBP18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 PPP1R2P9O14990 202 aa18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 CRYGCP07315 174 aa18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 Q71RC1 249 aaPredicted RBP18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 ZNF664Q8N3J9 261 aa18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 C11orf52Q96A22 123 aa18.33■□□□□ 0.53
CLPTM1-201ENST00000337392 ABCA12Q86UK0 2595 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 IGHV3OR16-10A0A075B7F0 116 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 NPSP0C0P6 89 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 PRTN3P24158 256 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 TIGITQ495A1 244 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 FXYD5Q96DB9 178 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 GOLT1BQ9Y3E0 138 aa18.33■□□□□ 0.52
CLPTM1-201ENST00000337392 NBR2O15453 112 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 PSG1P11464 419 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 HOXB4P17483 251 aaPredicted RBP18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 LYZP61626 148 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 SNHG12Q9BXW3 62 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 ODF3BA8MYP8 253 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 FAM120AOSQ5T036 256 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 OR5R1Q8NH85 324 aa18.32■□□□□ 0.52
CLPTM1-201ENST00000337392 COTL1Q14019 142 aa18.31■□□□□ 0.52
CLPTM1-201ENST00000337392 ASCL2Q99929 193 aa18.31■□□□□ 0.52
CLPTM1-201ENST00000337392 CBLN1P23435 193 aa18.31■□□□□ 0.52
CLPTM1-201ENST00000337392 TXNDC17Q9BRA2 123 aa18.31■□□□□ 0.52
CLPTM1-201ENST00000337392 IGLV2-8P01709 118 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 SRP14P37108 136 aaKnown RBP18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 KCNIP4Q6PIL6 250 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 TMEM116Q8NCL8 245 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 XKRY2A2RUG3 117 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 I3L2K1 104 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 FAM168AQ92567 244 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 TMEM208Q9BTX3 173 aa18.3■□□□□ 0.52
CLPTM1-201ENST00000337392 DLEU1O43261 78 aa18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 NOL4LQ96MY1 436 aaPredicted RBP18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 ISLRO14498 428 aa18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 ACTL10Q5JWF8 245 aa18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 PACRGQ96M98 296 aaPredicted RBP18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 MRPL32Q9BYC8 188 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-201ENST00000337392 A6NNC1 897 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 IGLC1P0CG04 106 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 PRR27Q6MZM9 219 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 ZNF329Q86UD4 541 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 OR8I2Q8N0Y5 310 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 IGHV3OR16-8A0A075B7F1 116 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 GRIFINA4D1Z8 144 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 K7EIM0 57 aa18.28■□□□□ 0.52
CLPTM1-201ENST00000337392 OR1L4Q8NGR5 311 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms