RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SP9P0CG40 484 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 AZU1P20160 251 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 MESP2Q0VG99 397 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 MORN2Q502X0 79 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 K7EP13 123 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 YPEL1O60688 119 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-201ENST00000334504 YPEL2Q96QA6 119 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 IGKV1-9A0A0C4DH69 117 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 LEPROTO15243 131 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-201ENST00000334504 TRGV11A0A075B6L2 103 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 J3QRE1 110 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 K7EP34 96 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 SH2D1AO60880 128 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 RPP25LQ8N5L8 163 aaKnown RBP8.11□□□□□ -1.11
COL4A6-201ENST00000334504 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 RASL10AQ92737 203 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 IMMP1LQ96LU5 166 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 LINC00312Q9Y6C7 94 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 GAGE12HA6NDE8 117 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 SUPT4H1P63272 117 aaKnown RBP8.11□□□□□ -1.11
COL4A6-201ENST00000334504 ZNF837Q96EG3 531 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-201ENST00000334504 CHCHD5Q9BSY4 110 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 FBLN5Q9UBX5 448 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 NBR2O15453 112 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 CECR9P0C854 216 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 CCL3L1P16619 93 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 SLC25A39Q9BZJ4 359 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-201ENST00000334504 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 B9A039 149 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 SELLP14151 372 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 ZNF876PQ49A33 203 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 APC2O95996 2303 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 Q6ZT83 130 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 STHQ8IWL8 128 aa8.11□□□□□ -1.11
COL4A6-201ENST00000334504 PSG7Q13046 419 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 SRSF8Q9BRL6 282 aaKnown RBP8.1□□□□□ -1.11
COL4A6-201ENST00000334504 CSTL1Q9H114 145 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 LTBP4Q8N2S1 1624 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 PMS2P5A8MQ11 134 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 F8W1H4 67 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 SRD5A1P18405 259 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 CDKN1BP46527 198 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 PRSS57Q6UWY2 283 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 DUTP33316 252 aaKnown RBP8.1□□□□□ -1.11
COL4A6-201ENST00000334504 C3orf36Q3SXR2 165 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 SLX1AQ9BQ83 275 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 KIAA1217Q5T5P2 1943 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 IQCF6A8MYZ5 107 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 CELA3BP08861 270 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
COL4A6-201ENST00000334504 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 CASP8AP2Q9UKL3 1982 aa8.1□□□□□ -1.11
COL4A6-201ENST00000334504 SIGLEC12Q96PQ1 595 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 INS-IGF2F8WCM5 200 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 LILRA1O75019 489 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 INSP01308 110 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 CELA3AP09093 270 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 Q0VG73 95 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 FAM90A1Q86YD7 464 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 OVOL1O14753 267 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 RGPD3A6NKT7 1758 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-201ENST00000334504 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 APOBEC3AP31941 199 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-201ENST00000334504 AMN1Q8IY45 258 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 SOCS3O14543 225 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 CD24P25063 80 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 WBP1Q96G27 269 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 SPXQ9BT56 116 aa8.09□□□□□ -1.11
COL4A6-201ENST00000334504 RPL15P61313 204 aaKnown RBP8.08□□□□□ -1.12
COL4A6-201ENST00000334504 LHFPL1Q86WI0 220 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 CHCHD2Q9Y6H1 151 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-201ENST00000334504 TRPM6Q9BX84 2022 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 MDC1Q14676 2089 aaKnown RBP8.08□□□□□ -1.12
COL4A6-201ENST00000334504 DLEC1Q9Y238 1755 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 IGLC2P0DOY2 106 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 IGLC3P0DOY3 106 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 SLAQ13239 276 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 PEMTQ9UBM1 199 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 VCYO14598 125 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 PRADC1Q9BSG0 188 aa8.08□□□□□ -1.12
COL4A6-201ENST00000334504 PTPRFP10586 1907 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms