RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
DDX28-201ENST00000332395 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
DDX28-201ENST00000332395 LHFPL4Q7Z7J7 247 aa13.86□□□□□ -0.19
DDX28-201ENST00000332395 CFHR4Q92496 578 aa13.86□□□□□ -0.19
DDX28-201ENST00000332395 NAGKQ9UJ70 344 aa13.86□□□□□ -0.19
DDX28-201ENST00000332395 ORM2P19652 201 aa13.86□□□□□ -0.19
DDX28-201ENST00000332395 SPTBN1Q01082 2364 aaKnown RBP13.86□□□□□ -0.19
DDX28-201ENST00000332395 SLC17A3O00476 420 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
DDX28-201ENST00000332395 OR5I1Q13606 314 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 OR1B1Q8NGR6 318 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 NDUFS7O75251 213 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 CNIH1O95406 144 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 IGFBPL1Q8WX77 278 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 PERPQ96FX8 193 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 IL36BQ9NZH7 164 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 TRAPPC1Q9Y5R8 145 aa13.85□□□□□ -0.19
DDX28-201ENST00000332395 A0A1W2PRD5 423 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 A0A1W2PRF3 423 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 A0A1W2PRM7 423 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 NBR2O15453 112 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 ZNF25P17030 456 aaPredicted RBP13.84□□□□□ -0.19
DDX28-201ENST00000332395 UQCRFS1P47985 274 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
DDX28-201ENST00000332395 TIGITQ495A1 244 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 MRPL52Q86TS9 123 aaKnown RBP13.84□□□□□ -0.19
DDX28-201ENST00000332395 ITLN2Q8WWU7 325 aaPredicted RBP13.84□□□□□ -0.19
DDX28-201ENST00000332395 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
DDX28-201ENST00000332395 UBTD1Q9HAC8 227 aa13.84□□□□□ -0.19
DDX28-201ENST00000332395 M0QZK8 103 aa13.83□□□□□ -0.19
DDX28-201ENST00000332395 CD24P25063 80 aa13.83□□□□□ -0.19
DDX28-201ENST00000332395 TMEM256Q8N2U0 113 aa13.83□□□□□ -0.19
DDX28-201ENST00000332395 IGF2BP2-AS1Q96M15 143 aa13.83□□□□□ -0.19
DDX28-201ENST00000332395 STXBP6Q8NFX7 210 aa13.83□□□□□ -0.2
DDX28-201ENST00000332395 NPBQ8NG41 125 aa13.83□□□□□ -0.2
DDX28-201ENST00000332395 MS4A10Q96PG2 267 aa13.83□□□□□ -0.2
DDX28-201ENST00000332395 WNT10AQ9GZT5 417 aa13.83□□□□□ -0.2
DDX28-201ENST00000332395 GSX1Q9H4S2 264 aaPredicted RBP13.83□□□□□ -0.2
DDX28-201ENST00000332395 V9GYV3 84 aa13.83□□□□□ -0.2
DDX28-201ENST00000332395 A6NNC1 897 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 I3L2K1 104 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 NUPR1O60356 82 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 NDUFA3O95167 84 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 IGLV2-8P01709 118 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 C1orf122Q6ZSJ8 110 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 VMO1Q7Z5L0 202 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 TRAV9-1A0A075B6T8 112 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 HYPMO75409 117 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 ZFP36P26651 326 aaKnown RBP13.82□□□□□ -0.2
DDX28-201ENST00000332395 CYB5R2Q6BCY4 276 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 KIR3DL3Q8N743 410 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 CDC42EP3Q9UKI2 254 aa13.82□□□□□ -0.2
DDX28-201ENST00000332395 A0A1B0GUS0 222 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 IGLC1P0CG04 106 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 GNLYP22749 145 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 PLP1P60201 277 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 HES1Q14469 280 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 FBLN7Q53RD9 439 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 ZNF705FA8MVS1 300 aaPredicted RBP13.81□□□□□ -0.2
DDX28-201ENST00000332395 DLEU1O43261 78 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 RPLP1P05386 114 aaKnown RBP13.81□□□□□ -0.2
DDX28-201ENST00000332395 ZNF705DP0CH99 300 aaPredicted RBP13.81□□□□□ -0.2
DDX28-201ENST00000332395 ZNF705BP0CI00 300 aaPredicted RBP13.81□□□□□ -0.2
DDX28-201ENST00000332395 RPEL1Q2QD12 228 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 LINC00479Q96M42 142 aa13.81□□□□□ -0.2
DDX28-201ENST00000332395 RNASE7Q9H1E1 156 aaKnown RBP13.81□□□□□ -0.2
DDX28-201ENST00000332395 FXYD3Q14802 87 aa13.8□□□□□ -0.2
DDX28-201ENST00000332395 TMEM208Q9BTX3 173 aa13.8□□□□□ -0.2
DDX28-201ENST00000332395 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
DDX28-201ENST00000332395 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 PEX7O00628 323 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 MGST1P10620 155 aaKnown RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 PSG1P11464 419 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 MYCNOSP40205 109 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 GAGE1Q13065 139 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 CCDC144NLQ6NUI1 221 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 ZNF705AQ6ZN79 300 aaPredicted RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 DYNAPQ8N1N2 210 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 ISLRO14498 428 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 EFNA4P52798 201 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
DDX28-201ENST00000332395 C5orf64Q2M2E5 130 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 BLNKQ8WV28 456 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 C20orf144Q9BQM9 153 aa13.79□□□□□ -0.2
DDX28-201ENST00000332395 K7EIM0 57 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 ADMP35318 185 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 RASL11BQ9BPW5 248 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 NBEAP1P0C6P0 100 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 GP9P14770 177 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 LYZP61626 148 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 IBA57Q5T440 356 aaKnown RBP13.78□□□□□ -0.2
DDX28-201ENST00000332395 NHLRC2Q8NBF2 726 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms