RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DEFB112Q30KQ8 113 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 OR4X1Q8NH49 305 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 TRGV9Q99603 122 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 F8W735 103 aaPredicted RBP14.44□□□□□ -0.1
USP39-201ENST00000323701 OR2J3O76001 311 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 IGHV3-23P01764 117 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 TIGITQ495A1 244 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 UNQ5815/PRO19632Q6UWF5 114 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 RBMS3Q6XE24 437 aaKnown RBP14.44□□□□□ -0.1
USP39-201ENST00000323701 Q6ZS46 218 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 DNAJC4Q9NNZ3 241 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 GSN-AS1Q9NRJ2 163 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 C1orf196B1AJZ1 125 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 J3QLI3 93 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 CXorf1O96002 111 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 GCHFRP30047 84 aa14.44□□□□□ -0.1
USP39-201ENST00000323701 PUS1Q9Y606 427 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP39-201ENST00000323701 ATP5G3P48201 142 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 PSMB3P49720 205 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 FAM167A-AS1Q96KT0 104 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 FSHBP01225 129 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 IFNA1P01562 189 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 PSG1P11464 419 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 ORM2P19652 201 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 SELENOTP62341 195 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 BLCAPP62952 87 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 RNF212Q495C1 297 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 OR51G1Q8NGK1 321 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 TCEAL7Q9BRU2 100 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 TUBA4BQ9H853 241 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 MANBALQ9NQG1 85 aa14.43□□□□□ -0.1
USP39-201ENST00000323701 YTHDF2Q9Y5A9 579 aaKnown RBP14.43□□□□□ -0.1
USP39-201ENST00000323701 CUBNO60494 3623 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 CLN5O75503 358 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 IGHV4-59P01825 116 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 MT-ND4LP03901 98 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 NPPCP23582 126 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 RHEBQ15382 184 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 OR4F5Q8NH21 305 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 OR4F4Q96R69 305 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 SLC25A2Q9BXI2 301 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 NOTCH2Q04721 2471 aa14.42□□□□□ -0.1
USP39-201ENST00000323701 COX7A2P2O60397 106 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 S100A6P06703 90 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 OR10J4P0C629 311 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 FAM24BQ8N5W8 94 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 OR1L6Q8NGR2 347 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 OR1B1Q8NGR6 318 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 H3BQ15 152 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 SNRPCP09234 159 aaKnown RBP14.41□□□□□ -0.1
USP39-201ENST00000323701 C9orf152Q5JTZ5 239 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 C10orf113Q5VZT2 155 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 CST9LP1Q5W188 147 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 FAM110DQ8TAY7 271 aaPredicted RBP14.41□□□□□ -0.1
USP39-201ENST00000323701 ZNF355PQ9NSJ1 428 aa14.41□□□□□ -0.1
USP39-201ENST00000323701 C11orf94C9JXX5 98 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 OR51M1Q9H341 326 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 NIT2Q9NQR4 276 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 SMAD7O15105 426 aaKnown RBP14.4□□□□□ -0.1
USP39-201ENST00000323701 OR7C2O60412 319 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 LINC00305Q7Z4B0 112 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 YPEL4Q96NS1 127 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 C19orf24Q9BVV8 132 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 TECRQ9NZ01 308 aaKnown RBP14.4□□□□□ -0.1
USP39-201ENST00000323701 FBXL7Q9UJT9 491 aa14.4□□□□□ -0.1
USP39-201ENST00000323701 C8orf88P0DMB2 117 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 PYYP10082 97 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 RAB5AP20339 215 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 S100PP25815 95 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 C19orf54Q5BKX5 351 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 LEMD1Q68G75 181 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 NOL4LQ96MY1 436 aaPredicted RBP14.39□□□□□ -0.11
USP39-201ENST00000323701 MYO9AB2RTY4 2548 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 OR5AU1Q8NGC0 362 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 ZNF48Q96MX3 618 aaPredicted RBP14.39□□□□□ -0.11
USP39-201ENST00000323701 MS4A10Q96PG2 267 aa14.39□□□□□ -0.11
USP39-201ENST00000323701 CYB5R2Q6BCY4 276 aa14.38□□□□□ -0.11
USP39-201ENST00000323701 RPUSD4Q96CM3 377 aaKnown RBP14.38□□□□□ -0.11
USP39-201ENST00000323701 PFDN5Q99471 154 aa14.38□□□□□ -0.11
USP39-201ENST00000323701 DERL1Q9BUN8 251 aa14.38□□□□□ -0.11
USP39-201ENST00000323701 C21orf62Q9NYP8 219 aa14.38□□□□□ -0.11
USP39-201ENST00000323701 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 OR2T8A6NH00 312 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 ZNF727A8MUV8 499 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 RD3LP0DJH9 198 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 LYZP61626 148 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 RHOGP84095 191 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 C15orf32Q32M92 178 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 OR1L4Q8NGR5 311 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 MRPL32Q9BYC8 188 aaKnown RBP14.37□□□□□ -0.11
USP39-201ENST00000323701 ANK3Q12955 4377 aaKnown RBP14.37□□□□□ -0.11
USP39-201ENST00000323701 IER3P46695 156 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 MFAP4P55083 255 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 BPIFB3P59826 476 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 ZNF674Q2M3X9 581 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 IL17RELQ6ZVW7 336 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 ZNF414Q96IQ9 312 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 NF1P21359 2839 aa14.37□□□□□ -0.11
USP39-201ENST00000323701 TRAV41A0A0B4J266 112 aa14.36□□□□□ -0.11
USP39-201ENST00000323701 GNG7O60262 68 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 293.1 ms