RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 SUPT4H1P63272 117 aaKnown RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 SSBP2P81877 361 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 SPXQ9BT56 116 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 ESM1Q9NQ30 184 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 K7EMI3 77 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 OVOL3O00110 214 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 MEF2CQ06413 473 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 AMN1Q8IY45 258 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 STPG4Q8N801 248 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 C2orf88Q9BSF0 95 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 TRIP12Q14669 1992 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 ZFP36L1Q07352 338 aaKnown RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 LBHQ53QV2 105 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 FMC1Q96HJ9 113 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 OTORQ9NRC9 128 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 A8MXK9 166 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 K7EM74 188 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 SH2D1AO60880 128 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 ALKBH7Q9BT30 221 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 SNRNP200O75643 2136 aaKnown RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 INS-IGF2F8WCM5 200 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BKO60814 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 INSP01308 110 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BJP06899 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BOP23527 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BBP33778 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BDP58876 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BCP62807 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST2H2BEQ16778 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.22□□□□□ -1.25
SSBP2-201ENST00000320672 FAM120AOSQ5T036 256 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BHQ93079 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BNQ99877 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 HIST1H2BMQ99879 126 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 GGTLC1Q9BX51 225 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 CA7P43166 264 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 TMEM144Q7Z5S9 345 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 PIP4P2Q8N4L2 257 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 TPSG1Q9NRR2 321 aa7.22□□□□□ -1.25
SSBP2-201ENST00000320672 ZNF503-AS2A6NEH8 195 aa7.21□□□□□ -1.25
SSBP2-201ENST00000320672 GATA4P43694 442 aa7.21□□□□□ -1.25
SSBP2-201ENST00000320672 CYTL1Q9NRR1 136 aa7.21□□□□□ -1.25
SSBP2-201ENST00000320672 NXPH4O95158 308 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 DEFB131AP59861 70 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 THSD7AQ9UPZ6 1657 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 MBD3L4A6NDZ8 208 aaPredicted RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 MBD3L3A6NE82 208 aaPredicted RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 MBD3L5A6NJ08 208 aaPredicted RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 IGHV1-8P0DP01 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 HLA-DMBP28068 263 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 MBD3L2Q8NHZ7 208 aaPredicted RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAGE12JA6NER3 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAS1P54826 345 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAGE1Q13065 139 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAGE4Q13068 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAGE5Q13069 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAGE13Q4V321 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GLRX5Q86SX6 157 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 IGKV1D-17A0A075B6S4 117 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 A0A1W2PRE2 83 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GRNP28799 593 aaKnown RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 GAFA1Q96PS6 74 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 TDRD6O60522 2096 aaKnown RBP7.21□□□□□ -1.26
SSBP2-201ENST00000320672 PAX4O43316 350 aa7.21□□□□□ -1.26
SSBP2-201ENST00000320672 CRPP02741 224 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 CRYGSP22914 178 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 IFI27P40305 119 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 SPINK13Q1W4C9 94 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 SRSF8Q9BRL6 282 aaKnown RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 A0A0G2JLM5 398 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 C9JQL5 133 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 YPEL1O60688 119 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 YPEL2Q96QA6 119 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 ZFC3H1O60293 1989 aaKnown RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 VGLL1Q99990 258 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 COL11A2P13942 1736 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 TPTE2P1Q5T6R2 138 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 SP5Q6BEB4 398 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 RPP25LQ8N5L8 163 aaKnown RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 PEMTQ9UBM1 199 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 PEF1Q9UBV8 284 aaKnown RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 E7EQL1 145 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 HOXA3O43365 443 aaPredicted RBP7.2□□□□□ -1.26
SSBP2-201ENST00000320672 LURAP1LQ8IV03 231 aa7.2□□□□□ -1.26
SSBP2-201ENST00000320672 TMEM178BH3BS89 294 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 IGKCP01834 107 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 PAX9P55771 341 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 CST9LQ9H4G1 147 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 NINQ8N4C6 2090 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 HOXB1P14653 301 aaPredicted RBP7.19□□□□□ -1.26
SSBP2-201ENST00000320672 TEX38Q6PEX7 206 aa7.19□□□□□ -1.26
SSBP2-201ENST00000320672 F6UB75 175 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms