RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 VKORC1L1Q8N0U8 176 aa6.92□□□□□ -1.3
PDLIM5-201ENST00000317968 TEX48A0A1B0GUV7 120 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 TFF3Q07654 80 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 OR2D3Q8NGH3 330 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 MBD3L1Q8WWY6 194 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 ZNF562Q6V9R5 426 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 C22orf34Q6ZV56 151 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 ALKBH7Q9BT30 221 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 TMEM97Q5BJF2 176 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 LINC00305Q7Z4B0 112 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 CIARTQ8N365 385 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 NEU1Q99519 415 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 A0A1B0GW64 132 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 AMY1AP04745 511 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 ARL2-SNX15V9GYD0 113 aa6.91□□□□□ -1.3
PDLIM5-201ENST00000317968 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 LOC102723971A0A1B0GUV8 181 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 INSP01308 110 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 IGKV1-39P01597 117 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 IGLV1-47P01700 117 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 IGKV1D-39P04432 117 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 C22orf46C9J442 243 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 LY6HO94772 140 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 PRSS2P07478 247 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 SFTA3P0C7M3 94 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 PMCHP20382 165 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 C15orf32Q32M92 178 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 HIST1H2BAQ96A08 127 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 MIEN1Q9BRT3 115 aa6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 FAM103A1Q9BTL3 118 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-201ENST00000317968 IGHV4-39P01824 125 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 SUMO1P63165 101 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 RUNX1Q01196 453 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 HSBP1O75506 76 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 IGFBP2P18065 325 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 CD24P25063 80 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 Q6ZRM9 215 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 OR9G4Q8NGQ1 327 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 RNF125Q96EQ8 232 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 NAT8BQ9UHF3 227 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 PCNTO95613 3336 aa6.9□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF134P52741 427 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 MEF2BQ02080 365 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 ZNF506Q5JVG8 444 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 RAB24Q969Q5 203 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 IL17RELQ6ZVW7 336 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 KLHDC1Q8N7A1 406 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 VN1R17PQ8TDU5 208 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 SGK494Q96LW2 274 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 KIR2DL4Q99706 377 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 TCAPO15273 167 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 FGF8P55075 233 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 Q1RN00 199 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 TRGV9Q99603 122 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 DAZ1Q9NQZ3 744 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 A0A0G2JRQ6 117 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 OVOL3O00110 214 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 NTF3P20783 257 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 RNASE4P34096 147 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 SPRNQ5BIV9 151 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 RMI2Q96E14 147 aa6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 RCC1LQ96I51 464 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV4-30-2A0A087WSY4 118 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 CXorf65A6NEN9 183 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 TNFRSF13BO14836 293 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 PSMG4Q5JS54 123 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 DUX4L9Q6RFH8 374 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 ASCL2Q99929 193 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 PIEZO2Q9H5I5 2752 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 PAGE4O60829 102 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 MFAP2P55001 183 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 SPATA31B1PQ5VZV4 182 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 TMPRSS5Q9H3S3 457 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV3OR16-13A0A075B7E8 117 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 IGHV3-74A0A0B4J1X5 117 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 A0A1W2PPQ1 181 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 CLPSL1A2RUU4 121 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
PDLIM5-201ENST00000317968 HAPLN4Q86UW8 402 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms