RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SYNJ2BPP57105 145 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 PRADC1Q9BSG0 188 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 EMDP50402 254 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 MP68P56378 58 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 DMRTC1Q5HYR2 192 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 Q6ZS49 121 aa4.08□□□□□ -1.76
CSMD3-201ENST00000297405 ZAR1Q86SH2 424 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 HCFC1R1Q9NWW0 138 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 DNAJC25-GNG10A0A024R161 153 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TDGF1P13385 188 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 MRPL14Q6P1L8 145 aaKnown RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 RASL10AQ92737 203 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 MRPS18BQ9Y676 258 aaKnown RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 H3BT86 120 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 CXorf66Q5JRM2 361 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 CDCP2Q5VXM1 449 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 ATRAIDQ6UW56 229 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 WIPF2Q8TF74 440 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM171Q8WVE6 324 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 LINC00271P0C7V0 271 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TFPI2P48307 235 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 C6orf15Q6UXA7 325 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 ZNF114Q8NC26 417 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM74BQ9NUR3 256 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 Q6ZS92 163 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 CENPVQ7Z7K6 275 aaPredicted RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 F8VRH5 84 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 H0YIZ8 118 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 ETDBQ3ZM63 59 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 STPG4Q8N801 248 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 COL18A1P39060 1754 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TCRBV4S1A1TA0A5B7 111 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 ADM5C9JUS6 153 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 JMJD7-PLA2G4BH0Y9G9 81 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 HMGA1P17096 107 aaKnown RBP4.07□□□□□ -1.76
CSMD3-201ENST00000297405 FAM231DQ6ZW35 169 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 HS3ST6Q96QI5 342 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 IFI27L2Q9H2X8 130 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TRGV11A0A075B6L2 103 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 RNF186Q9NXI6 227 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 C21orf140B9A014 251 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 NXPH1P58417 271 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 SSPNQ14714 243 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 C1orf210Q8IVY1 113 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 CT55Q8WUE5 264 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 G3V4G9 280 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 DUX5Q96PT3 197 aa4.07□□□□□ -1.76
CSMD3-201ENST00000297405 TRGV8A0A0C4DH27 118 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 H0YGX0 51 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 CEND1Q8N111 149 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 RNF126Q9BV68 326 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 GLIS2Q9BZE0 524 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 C15orf61A6NNL5 157 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 GZMMP51124 257 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 UNC119Q13432 240 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 LY6G5BQ8NDX9 201 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM52Q8NDY8 209 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 A0A087X0K7 114 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 E9PQ18 207 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 FOXA3P55318 350 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 PIGYQ3MUY2 71 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TIMM21Q9BVV7 248 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 CFHR5Q9BXR6 569 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 COL9A1P20849 921 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 WNT5AP41221 380 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM42Q69YG0 159 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 ZNF319Q9P2F9 582 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 MED19A0JLT2 244 aaPredicted RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TGIF1Q15583 401 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 C18orf12Q96KH6 178 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 CENPEQ02224 2701 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 TRGV5A0A0B4J1U4 118 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 ID3Q02535 119 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 FXYD3Q14802 87 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 Q9H3A6 140 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 FAM157BP0CG42 384 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 NANOS3P60323 173 aaKnown RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 INSL4Q14641 139 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 DUSP14O95147 198 aaKnown RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 GREM1O60565 184 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 C1QCP02747 245 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
CSMD3-201ENST00000297405 LOXL3P58215 753 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 ST6GALNAC3Q8NDV1 305 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 PILRBQ9UKJ0 227 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 M0R381 172 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 C3orf79P0CE67 100 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 HGFACQ04756 655 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 ZNF525Q8N782 197 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 NABP1Q96AH0 204 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 YPEL2Q96QA6 119 aa4.06□□□□□ -1.76
CSMD3-201ENST00000297405 NPSP0C0P6 89 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TRGV9Q99603 122 aa4.05□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM243Q9BU79 118 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms