RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 CRYBB3P26998 211 aa10□□□□□ -0.81
VPS28-201ENST00000292510 TFPI2P48307 235 aa10□□□□□ -0.81
VPS28-201ENST00000292510 BCAP31P51572 246 aa10□□□□□ -0.81
VPS28-201ENST00000292510 TAS2R30P59541 319 aa10□□□□□ -0.81
VPS28-201ENST00000292510 AKR1C1Q04828 323 aa10□□□□□ -0.81
VPS28-201ENST00000292510 ARL16Q0P5N6 197 aa10□□□□□ -0.81
VPS28-201ENST00000292510 OR2F1Q13607 317 aa10□□□□□ -0.81
VPS28-201ENST00000292510 FAM90A2PQ658T7 463 aa10□□□□□ -0.81
VPS28-201ENST00000292510 TCF24Q7RTU0 167 aa10□□□□□ -0.81
VPS28-201ENST00000292510 THAP8Q8NA92 274 aa10□□□□□ -0.81
VPS28-201ENST00000292510 OR51G1Q8NGK1 321 aa10□□□□□ -0.81
VPS28-201ENST00000292510 PBDC1Q9BVG4 233 aa10□□□□□ -0.81
VPS28-201ENST00000292510 FAM24AA6NFZ4 105 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 GATA2P23769 480 aaPredicted RBP9.99□□□□□ -0.81
VPS28-201ENST00000292510 CAV2P51636 162 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 SBSPONQ8IVN8 264 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 GBGT1Q8N5D6 347 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 TRGV9Q99603 122 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
VPS28-201ENST00000292510 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 UBQLN2Q9UHD9 624 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 ALG5Q9Y673 324 aa9.99□□□□□ -0.81
VPS28-201ENST00000292510 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS28-201ENST00000292510 BMI1P35226 326 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 P2RY1P47900 373 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 H2BFSP57053 126 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 LYZP61626 148 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 DLK1P80370 383 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 TMEM182Q6ZP80 229 aaPredicted RBP9.98□□□□□ -0.81
VPS28-201ENST00000292510 OR10P1Q8NGE3 313 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 TUBA4BQ9H853 241 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 U3KQE9 123 aa9.98□□□□□ -0.81
VPS28-201ENST00000292510 A0A1W2PS18 150 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 OR4C46A6NHA9 309 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 A8MZ25 164 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 CST7O76096 145 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
VPS28-201ENST00000292510 RPL11P62913 178 aaKnown RBP9.97□□□□□ -0.81
VPS28-201ENST00000292510 TMEM144Q7Z5S9 345 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 WFDC3Q8IUB2 231 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 NARS2Q96I59 477 aaKnown RBP9.97□□□□□ -0.81
VPS28-201ENST00000292510 CITED4Q96RK1 184 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 NMES1Q9C002 83 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 TMEM231Q9H6L2 316 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 SRD5A3Q9H8P0 318 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 RABAC1Q9UI14 185 aa9.97□□□□□ -0.81
VPS28-201ENST00000292510 IGSF23A1L1A6 192 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 FABP1P07148 127 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 C16orf54Q6UWD8 224 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 TMEM217Q8N7C4 229 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 MS4A6AQ9H2W1 248 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 LYRM2Q9NU23 88 aaPredicted RBP9.96□□□□□ -0.82
VPS28-201ENST00000292510 OR5AC2Q9NZP5 309 aa9.96□□□□□ -0.82
VPS28-201ENST00000292510 RBMY1BA6NDE4 496 aaKnown RBP9.95□□□□□ -0.82
VPS28-201ENST00000292510 RBMY1EA6NEQ0 496 aaKnown RBP9.95□□□□□ -0.82
VPS28-201ENST00000292510 H0YIZ8 118 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
VPS28-201ENST00000292510 BUB3O43684 328 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 DEDDO75618 318 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 RBMY1DP0C7P1 496 aaKnown RBP9.95□□□□□ -0.82
VPS28-201ENST00000292510 EIF2B2P49770 351 aaKnown RBP9.95□□□□□ -0.82
VPS28-201ENST00000292510 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 CYP2G1PQ6ZSU1 146 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 FAM24BQ8N5W8 94 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 STXBP6Q8NFX7 210 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 GRAMD2BQ96HH9 432 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 NPVFQ9HCQ7 196 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
VPS28-201ENST00000292510 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 FNDC10F2Z333 226 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 CD5P06127 495 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 CXCL3P19876 107 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 SULT1A1P50225 295 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
VPS28-201ENST00000292510 ZNF124Q15973 351 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 HAGHQ16775 308 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 RGS21Q2M5E4 152 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 LINC00322Q6ZN03 302 aaPredicted RBP9.94□□□□□ -0.82
VPS28-201ENST00000292510 BPIFCQ8NFQ6 507 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 PPP1R1CQ8WVI7 109 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 DOK5Q9P104 306 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 STAB2Q8WWQ8 2551 aa9.94□□□□□ -0.82
VPS28-201ENST00000292510 RLN2P04090 185 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
VPS28-201ENST00000292510 ORM2P19652 201 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 PAFAH1B2P68402 229 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 FCN2Q15485 313 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 PPP1R14BQ96C90 147 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 GGACTQ9BVM4 153 aa9.93□□□□□ -0.82
VPS28-201ENST00000292510 MAP6D1Q9H9H5 199 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms