RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 HYPMO75409 117 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 ECSCRQ19T08 205 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 C1QL4Q86Z23 238 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 FRZBQ92765 325 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 SFRP2Q96HF1 295 aa14.2□□□□□ -0.14
CAPN1-201ENST00000279247 MRPL32Q9BYC8 188 aaKnown RBP14.2□□□□□ -0.14
CAPN1-201ENST00000279247 SOX21Q9Y651 276 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-201ENST00000279247 TLN2Q9Y4G6 2542 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 IGHV4-30-2A0A087WSY4 118 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 PFN1P07737 140 aaKnown RBP14.19□□□□□ -0.14
CAPN1-201ENST00000279247 C1orf122Q6ZSJ8 110 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 C19orf24Q9BVV8 132 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 IGLC1P0CG04 106 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 GNG4P50150 75 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 CCDC168Q8NDH2 2452 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 MALSU1Q96EH3 234 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 TMUB1Q9BVT8 246 aa14.19□□□□□ -0.14
CAPN1-201ENST00000279247 TRAV40A0A0B4J280 105 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 C5orf52A6NGY3 159 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 K7EIM0 57 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 NDUFA3O95167 84 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 NPBQ8NG41 125 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 SGMS2Q8NHU3 365 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 PIMREGQ9BSJ6 248 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 PPP5D1E7EU14 171 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 SPINK4O60575 86 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BKO60814 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 OR2J3O76001 311 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BJP06899 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BOP23527 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BBP33778 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 UBE2E1P51965 193 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BDP58876 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BCP62807 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST2H2BEQ16778 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BHQ93079 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 TRGV9Q99603 122 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BNQ99877 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 HIST1H2BMQ99879 126 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 TXNDC17Q9BRA2 123 aa14.18□□□□□ -0.14
CAPN1-201ENST00000279247 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
CAPN1-201ENST00000279247 TRGC1P0CF51 173 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 ERVFC1-1P60608 527 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 CLEC2AQ6UVW9 174 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 HSPB9Q9BQS6 159 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 FAM106CPP0CH98 169 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 MINOS1Q5TGZ0 78 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 GFI1BQ5VTD9 330 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 ANAPC16Q96DE5 110 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 RNASE7Q9H1E1 156 aaKnown RBP14.17□□□□□ -0.14
CAPN1-201ENST00000279247 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 MINOS1-NBL1R4GNA1 71 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 CENPVL3A0A0U1RRI6 287 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 AP4M1O00189 453 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 Q56UQ5 140 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 MAPK1IP1LQ8NDC0 245 aa14.17□□□□□ -0.14
CAPN1-201ENST00000279247 APCP25054 2843 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 ZNF320A2RRD8 509 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 NPFFO15130 113 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 GNG7O60262 68 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 TEX38Q6PEX7 206 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 ZNF562Q6V9R5 426 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 BCL6BQ8N143 479 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-201ENST00000279247 OR10G8Q8NGN5 311 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 ZNF469Q96JG9 3925 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-201ENST00000279247 ELOA3CA0A087WX78 387 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-201ENST00000279247 FXYD5Q96DB9 178 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 RNF2Q99496 336 aa14.16□□□□□ -0.14
CAPN1-201ENST00000279247 LINC01548A6NM66 108 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 SLC35B1P78383 322 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 PRR27Q6MZM9 219 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 SERTAD4Q9NUC0 356 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 HIGD1AQ9Y241 93 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 TRBV24-1A0A075B6N3 115 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 IL4P05112 153 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 TCL1AP56279 114 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 KRTAP10-9P60411 292 aa14.15□□□□□ -0.14
CAPN1-201ENST00000279247 IGHV7-81A0A0B4J1V7 117 aa14.15□□□□□ -0.15
CAPN1-201ENST00000279247 PGPA6NDG6 321 aa14.15□□□□□ -0.15
CAPN1-201ENST00000279247 SLC25A5P05141 298 aaKnown RBP14.15□□□□□ -0.15
CAPN1-201ENST00000279247 KCNIP4Q6PIL6 250 aa14.15□□□□□ -0.15
CAPN1-201ENST00000279247 Q8N9W7 124 aa14.15□□□□□ -0.15
CAPN1-201ENST00000279247 AJUBAQ96IF1 538 aa14.15□□□□□ -0.15
CAPN1-201ENST00000279247 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 OR2T8A6NH00 312 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 BRS3P32247 399 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 C9orf152Q5JTZ5 239 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 LINC00518Q8N0U6 118 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 C11orf52Q96A22 123 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 FANCD2OSQ96PS1 177 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 C12orf57Q99622 126 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 G3V318 75 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 NBEAP1P0C6P0 100 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 HECTD1Q9ULT8 2610 aa14.14□□□□□ -0.15
CAPN1-201ENST00000279247 NDUFB8O95169 186 aa14.13□□□□□ -0.15
CAPN1-201ENST00000279247 LY6EQ16553 131 aa14.13□□□□□ -0.15
CAPN1-201ENST00000279247 UNQ5815/PRO19632Q6UWF5 114 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms