RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 CORTO00230 105 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 HMGB3O15347 200 aaKnown RBP9.87□□□□□ -0.83
SGCE-201ENST00000265735 RHOBP62745 196 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 SLC35B1P78383 322 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 PRR20EP86478 221 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 PRR20CP86479 221 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 PRR20DP86480 221 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 PRR20BP86481 221 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 PRR20AP86496 221 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 CYB561D1Q8N8Q1 229 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 SLC45A2Q9UMX9 530 aa9.87□□□□□ -0.83
SGCE-201ENST00000265735 TSSC4Q9Y5U2 329 aaPredicted RBP9.87□□□□□ -0.83
SGCE-201ENST00000265735 TCRBV4S1A1TA0A5B7 111 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 FAM74A7A6NL05 159 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 M0R036 132 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 FCN1O00602 326 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 MT-CO2P00403 227 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 PPIFP30405 207 aaKnown RBP9.86□□□□□ -0.83
SGCE-201ENST00000265735 CRIP2P52943 208 aaPredicted RBP9.86□□□□□ -0.83
SGCE-201ENST00000265735 CEBPGP53567 150 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 NSUN5P1Q3KNT7 163 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 FAM74A3Q4VXF1 159 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 PVRIGQ6DKI7 326 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 IQCF2Q8IXL9 164 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 OR1P1Q8NH06 330 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
SGCE-201ENST00000265735 PLXNB1O43157 2135 aa9.86□□□□□ -0.83
SGCE-201ENST00000265735 TSPAN4O14817 238 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 ATP6V0E1O15342 81 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 NUPL2O15504 423 aaKnown RBP9.85□□□□□ -0.83
SGCE-201ENST00000265735 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
SGCE-201ENST00000265735 CNIH1O95406 144 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 CXorf1O96002 111 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 REG1AP05451 166 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 OR10J1P30954 320 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 CX3CL1P78423 397 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 NDPQ00604 133 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 MEF2BQ02080 365 aaPredicted RBP9.85□□□□□ -0.83
SGCE-201ENST00000265735 RHEBQ15382 184 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 C19orf54Q5BKX5 351 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 TEX38Q6PEX7 206 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 ZNF562Q6V9R5 426 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 ACY3Q96HD9 319 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 NIPSNAP3BQ9BS92 247 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SGCE-201ENST00000265735 TEX22C9J3V5 150 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 IGHG4P01861 327 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 LINC00869P0C866 280 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 STAG3L2P0CL84 134 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 STAG3L3P0CL85 134 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 EGR2P11161 476 aaPredicted RBP9.84□□□□□ -0.83
SGCE-201ENST00000265735 OR4F17Q8NGA8 305 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
SGCE-201ENST00000265735 OR4F4Q96R69 305 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
SGCE-201ENST00000265735 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
SGCE-201ENST00000265735 F11RQ9Y624 299 aaKnown RBP9.84□□□□□ -0.83
SGCE-201ENST00000265735 IGKV1OR2-108A0A075B7D4 117 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 H3BQ15 152 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 ELANEP08246 267 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 DEFA4P12838 97 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 AREGP15514 252 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 PSMB8P28062 276 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
SGCE-201ENST00000265735 FOXE3Q13461 319 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 MLANAQ16655 118 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 AKIRIN2Q53H80 203 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 CYP2G1PQ6ZSU1 146 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 TVP23CQ96ET8 276 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 MISP3Q96FF7 219 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 FNDC4Q9H6D8 234 aaPredicted RBP9.83□□□□□ -0.84
SGCE-201ENST00000265735 SMCO4Q9NRQ5 59 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 MGAM2Q2M2H8 2515 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 CMYA5Q8N3K9 4069 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 A0A1W2PRX2 142 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 G3V318 75 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 TMEM250H0YL14 139 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 IGLV1-40P01703 118 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 CRYGCP07315 174 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 SELENOTP62341 195 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 THAP8Q8NA92 274 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 OR1L6Q8NGR2 347 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 ABHD5Q8WTS1 349 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 RNF2Q99496 336 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 TXNDC17Q9BRA2 123 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
SGCE-201ENST00000265735 TRAV41A0A0B4J266 112 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 PAGE4O60829 102 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 ARL14EPLP0DKL9 152 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 CD81P60033 236 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 FXYD3Q14802 87 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 FAM90A2PQ658T7 463 aa9.82□□□□□ -0.84
SGCE-201ENST00000265735 MYOZ3Q8TDC0 251 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms