RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 MED9Q9NWA0 146 aa18.69■□□□□ 0.58
SCN1B-201ENST00000262631 LINC01619G3V211 115 aa18.69■□□□□ 0.58
SCN1B-201ENST00000262631 GATA2P23769 480 aaPredicted RBP18.69■□□□□ 0.58
SCN1B-201ENST00000262631 DPF1Q92782 380 aa18.69■□□□□ 0.58
SCN1B-201ENST00000262631 AGPAT2O15120 278 aa18.68■□□□□ 0.58
SCN1B-201ENST00000262631 RPEL1Q2QD12 228 aa18.68■□□□□ 0.58
SCN1B-201ENST00000262631 IGHV3OR16-8A0A075B7F1 116 aa18.67■□□□□ 0.58
SCN1B-201ENST00000262631 PSG1P11464 419 aa18.67■□□□□ 0.58
SCN1B-201ENST00000262631 UNQ9165/PRO28630Q6UXU0 137 aa18.67■□□□□ 0.58
SCN1B-201ENST00000262631 BCL2L11O43521 198 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 IFNA5P01569 189 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 YPEL3P61236 119 aaPredicted RBP18.66■□□□□ 0.58
SCN1B-201ENST00000262631 ZNF266Q14584 549 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 CYP2G1PQ6ZSU1 146 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 RCC1LQ96I51 464 aaKnown RBP18.66■□□□□ 0.58
SCN1B-201ENST00000262631 GGTLC1Q9BX51 225 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 NPCDR1Q9BY65 106 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 PUS1Q9Y606 427 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCN1B-201ENST00000262631 RFNGQ9Y644 331 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 TAAR5O14804 337 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 RD3LP0DJH9 198 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 ZP3P21754 424 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 CAMLGP49069 296 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 ZNF600Q6ZNG1 722 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 RSG1Q9BU20 258 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 SLC45A2Q9UMX9 530 aa18.66■□□□□ 0.58
SCN1B-201ENST00000262631 KANTRA0A1W2PQU2 76 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 SCGB2A1O75556 95 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 YIF1AO95070 293 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 TOMM40O96008 361 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 SYNJ2BPP57105 145 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 RELQ04864 619 aaPredicted RBP18.65■□□□□ 0.58
SCN1B-201ENST00000262631 FAM122CQ6P4D5 195 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 TOMM20LQ6UXN7 152 aa18.65■□□□□ 0.58
SCN1B-201ENST00000262631 WNK1Q9H4A3 2382 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 MPDU1O75352 247 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 KLF5Q13887 457 aaPredicted RBP18.64■□□□□ 0.57
SCN1B-201ENST00000262631 GPHB5Q86YW7 130 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 HSD17B11Q8NBQ5 300 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 BPIFCQ8NFQ6 507 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 SCGB1C1Q8TD33 95 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 DLX4Q92988 240 aaPredicted RBP18.64■□□□□ 0.57
SCN1B-201ENST00000262631 PARD6GQ9BYG4 376 aaPredicted RBP18.64■□□□□ 0.57
SCN1B-201ENST00000262631 ZFAND3Q9H8U3 227 aa18.64■□□□□ 0.57
SCN1B-201ENST00000262631 TSPAN15O95858 294 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 MYCNOSP40205 109 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 RAB31Q13636 194 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 MIC13Q5XKP0 118 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 OR4F17Q8NGA8 305 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 OR4F4Q96R69 305 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 NDUFA4O00483 81 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 Q8WTZ3 238 aa18.63■□□□□ 0.57
SCN1B-201ENST00000262631 ZNF471Q9BX82 626 aaPredicted RBP18.63■□□□□ 0.57
SCN1B-201ENST00000262631 BORCS7-ASMTA0A0B4J1R7 106 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 ZNF320A2RRD8 509 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 JTBO76095 146 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 LINC00869P0C866 280 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 OPCMLQ14982 345 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 OR51G1Q8NGK1 321 aa18.62■□□□□ 0.57
SCN1B-201ENST00000262631 PF4P02776 101 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 IL4P05112 153 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 PRR20EP86478 221 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 PRR20CP86479 221 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 PRR20DP86480 221 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 PRR20BP86481 221 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 PRR20AP86496 221 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 FAM106AQ4KMX7 169 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 STPG3Q8N7X2 389 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 SPATA3Q8NHX4 192 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 TMEM190Q8WZ59 177 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 C20orf24Q9BUV8 137 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 SH3BGRL3Q9H299 93 aa18.61■□□□□ 0.57
SCN1B-201ENST00000262631 FABP1P07148 127 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 ATP6V0CP27449 155 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 RPL29P47914 159 aaKnown RBP18.6■□□□□ 0.57
SCN1B-201ENST00000262631 SELENOTP62341 195 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 USF2Q15853 346 aaPredicted RBP18.6■□□□□ 0.57
SCN1B-201ENST00000262631 C1QL4Q86Z23 238 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 PXMP4Q9Y6I8 212 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 WI2-2373I1.2A0A1W2PRP0 233 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 ZNF207O43670 478 aaKnown RBP18.6■□□□□ 0.57
SCN1B-201ENST00000262631 ARV1Q9H2C2 271 aa18.6■□□□□ 0.57
SCN1B-201ENST00000262631 KRBOX1C9JBD0 128 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 EDN2P20800 178 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 LYZP61626 148 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 LINC00482Q8N8I6 264 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 ZNF709Q8N972 641 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 RNF125Q96EQ8 232 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 PBDC1Q9BVG4 233 aa18.59■□□□□ 0.57
SCN1B-201ENST00000262631 M0QZ24 198 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 B2MP61769 119 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 TM4SF20Q53R12 229 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 REC114Q7Z4M0 266 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 GINS3Q9BRX5 216 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 SLC39A9Q9NUM3 307 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 DOK5Q9P104 306 aa18.58■□□□□ 0.57
SCN1B-201ENST00000262631 LGALS9O00182 355 aa18.57■□□□□ 0.56
SCN1B-201ENST00000262631 DNHD1Q96M86 4753 aa18.57■□□□□ 0.56
SCN1B-201ENST00000262631 TMEM213A2RRL7 107 aa18.57■□□□□ 0.56
SCN1B-201ENST00000262631 C17orf112F2Z3M2 114 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms