RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 NPIPB5A8MRT5 1133 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 K7EIM0 57 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 IGHV4-39P01824 125 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 FAM106CPP0CH98 169 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 S100A2P29034 98 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 TAS2R60P59551 318 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 LYZP61626 148 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 OR5I1Q13606 314 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 FBLN7Q53RD9 439 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 RBM14Q96PK6 669 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 TBX15Q96SF7 602 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 LPAR2Q9HBW0 351 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 PITPNC1Q9UKF7 332 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 CDC42EP3Q9UKI2 254 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 PEX7O00628 323 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 CX3CL1P78423 397 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 RPEL1Q2QD12 228 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 BLNKQ8WV28 456 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 C1RLQ9NZP8 487 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 PCP4L1A6NKN8 68 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 SLC17A3O00476 420 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 GCGP01275 180 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 NBEAP1P0C6P0 100 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 BRS3P32247 399 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 RANP62826 216 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 HIST3H2BBQ8N257 126 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
SPTLC1-201ENST00000262554 TACC2O95359 2948 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 GP9P14770 177 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 MYCNOSP40205 109 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 GFI1BQ5VTD9 330 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 TTC9CQ8N5M4 171 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 CCL19Q99731 98 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 TRAPPC1Q9Y5R8 145 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 V9GYV3 84 aa10.22□□□□□ -0.77
SPTLC1-201ENST00000262554 TRAV30A0A087WSZ9 112 aa10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 ISLRO14498 428 aa10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 IGLV2-8P01709 118 aa10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 SLC25A5P05141 298 aaKnown RBP10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 ASPHD1Q5U4P2 390 aa10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 GPR61Q9BZJ8 451 aa10.21□□□□□ -0.77
SPTLC1-201ENST00000262554 WNK2Q9Y3S1 2297 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 IGLV11-55A0A075B6I3 123 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 XKRY2A2RUG3 117 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 PGPA6NDG6 321 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 TOMM40O96008 361 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 SNRPCP09234 159 aaKnown RBP10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 SAA4P35542 130 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 PDZD11Q5EBL8 140 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 LEMD1Q68G75 181 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 TMEM183AQ8IXX5 376 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 PIMREGQ9BSJ6 248 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 THYN1Q9P016 225 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 MRPL27Q9P0M9 148 aaKnown RBP10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 EPDR1Q9UM22 224 aa10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 POLR3KQ9Y2Y1 108 aaPredicted RBP10.21□□□□□ -0.78
SPTLC1-201ENST00000262554 A6NJY4 79 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 NPFFO15130 113 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 GNG7O60262 68 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 HIST1H1BP16401 226 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 MFAP4P55083 255 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 UBE2G1P62253 170 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 RPL19P84098 196 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 NDPQ00604 133 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 IBA57Q5T440 356 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 ZNF600Q6ZNG1 722 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 BAGE2Q86Y30 109 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 Q8N9W7 124 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 FAM168AQ92567 244 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 LINC00479Q96M42 142 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 ZNF48Q96MX3 618 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 FANCD2OSQ96PS1 177 aa10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 RNASE7Q9H1E1 156 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-201ENST00000262554 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 S100A7AQ86SG5 101 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 C5orf17Q8NAS9 161 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 TMEM68Q96MH6 324 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 IGHV7-81A0A0B4J1V7 117 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 TRAV34A0A0B4J273 112 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 HLA-DRB1P01911 266 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 GNG5P63218 68 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 TMEM183BQ1AE95 376 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 NHLRC2Q8NBF2 726 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 Q9H3A6 140 aa10.19□□□□□ -0.78
SPTLC1-201ENST00000262554 NIT2Q9NQR4 276 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms