RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 EMP1P54849 157 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 RAB11AP62491 216 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 SMCO1Q147U7 214 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
TRAF4-202ENST00000262396 GLMPQ8WWB7 406 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 IL22RA2Q969J5 263 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 MIXL1Q9H2W2 232 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 ZNF705EA8MWA4 302 aaPredicted RBP8.88□□□□□ -0.99
TRAF4-202ENST00000262396 LYZP61626 148 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 TMED4Q7Z7H5 227 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 RNF125Q96EQ8 232 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 C7orf50Q9BRJ6 194 aaKnown RBP8.88□□□□□ -0.99
TRAF4-202ENST00000262396 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 RBKSQ9H477 322 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 PRR13Q9NZ81 148 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 TMEM56-RWDD3S4R434 201 aa8.88□□□□□ -0.99
TRAF4-202ENST00000262396 A0A0B4J2A0 478 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 FABP12A6NFH5 140 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 SNRPGP15A8MWD9 76 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 CTDSPLO15194 276 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 BUB3O43684 328 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 SMIM18P0DKX4 95 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 ATP5IP56385 69 aaPredicted RBP8.87□□□□□ -0.99
TRAF4-202ENST00000262396 FXYD7P58549 80 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 RPP30P78346 268 aaKnown RBP8.87□□□□□ -0.99
TRAF4-202ENST00000262396 SPCS2Q15005 226 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 AARDQ4LEZ3 155 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 OR8G2PQ6IF36 304 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 EBLN2Q6P2I7 272 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 OR8I2Q8N0Y5 310 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 RNF126Q9BV68 326 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
TRAF4-202ENST00000262396 SHPKQ9UHJ6 478 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 U3KQE9 123 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 X6R8D5 127 aa8.87□□□□□ -0.99
TRAF4-202ENST00000262396 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-202ENST00000262396 TMEM189A5PLL7 270 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 H3BMM0 161 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 MED6O75586 246 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 IFNA21P01568 189 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 GIG44P09565 113 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-202ENST00000262396 SPART-AS1P0CW21 52 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 P0DMU3 169 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 VAMP1P23763 118 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 S100A7P31151 101 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 NKX2-1P43699 371 aaPredicted RBP8.86□□□□□ -0.99
TRAF4-202ENST00000262396 AP3S2P59780 193 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 PRR20EP86478 221 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 PRR20CP86479 221 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 PRR20DP86480 221 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 PRR20BP86481 221 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 PRR20AP86496 221 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 OR2F1Q13607 317 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 CCDC59Q9P031 241 aaKnown RBP8.86□□□□□ -0.99
TRAF4-202ENST00000262396 HSPB7Q9UBY9 170 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 GOLT1BQ9Y3E0 138 aa8.86□□□□□ -0.99
TRAF4-202ENST00000262396 ANKRD20A5PA0PJZ0 165 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 IAPPP10997 89 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 HLA-DRB4P13762 266 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 GPX4P36969 197 aaPredicted RBP8.85□□□□□ -0.99
TRAF4-202ENST00000262396 PYDC2Q56P42 97 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 SAMD13Q5VXD3 122 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 TMEM208Q9BTX3 173 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 HLA-DRB4X5D2U9 266 aa8.85□□□□□ -0.99
TRAF4-202ENST00000262396 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 HTN3P15516 51 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 GALR1P47211 349 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 SUPT4H1P63272 117 aaKnown RBP8.84□□□□□ -0.99
TRAF4-202ENST00000262396 ZNF90Q03938 601 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 GAMTQ14353 236 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 FOXI2Q6ZQN5 318 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 TOMM5Q8N4H5 51 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 MCFD2Q8NI22 146 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 TMEM170AQ8WVE7 144 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 CIB3Q96Q77 187 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-202ENST00000262396 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
TRAF4-202ENST00000262396 CCDC160A6NGH7 325 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 CFDP00746 253 aaPredicted RBP8.83□□□□□ -1
TRAF4-202ENST00000262396 HBE1P02100 147 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 INPP1P49441 399 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 PSMB3P49720 205 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 TMBIM6P55061 237 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 SPATA31B1PQ5VZV4 182 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 GGNBP1Q5YKI7 109 aa8.83□□□□□ -1
TRAF4-202ENST00000262396 LINC00336Q6ZUF6 198 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms