RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 PPBPP02775 128 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 WBP1Q96G27 269 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 ITGB1BP1O14713 200 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 UBE2E2Q96LR5 201 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 CRIM1Q9NZV1 1036 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
CUX2-201ENST00000261726 LYZL4Q96KX0 146 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 VSIRQ9H7M9 311 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 PMS2P5A8MQ11 134 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
CUX2-201ENST00000261726 D6R8Y8 96 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 TCRAP04437 139 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 C15orf32Q32M92 178 aa11.82□□□□□ -0.52
CUX2-201ENST00000261726 GTF3AQ92664 365 aaKnown RBP11.82□□□□□ -0.52
CUX2-201ENST00000261726 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
CUX2-201ENST00000261726 SLC25A28Q96A46 364 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 TEX43Q6ZNM6 134 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 A8MXK9 166 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 A0A1W2PRE2 83 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 TSKUQ8WUA8 353 aa11.81□□□□□ -0.52
CUX2-201ENST00000261726 LINC00587B1AMM8 73 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 SCRT1Q9BWW7 348 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
CUX2-201ENST00000261726 HSD52Q0P140 79 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
CUX2-201ENST00000261726 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 ANAPC10Q9UM13 185 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 C10orf55Q5SWW7 151 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 RNF126Q9BV68 326 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 MBNL3Q9NUK0 354 aaKnown RBP11.8□□□□□ -0.52
CUX2-201ENST00000261726 FCN3O75636 299 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 ERCC8Q13216 396 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 A0A1B0GTI1 187 aa11.8□□□□□ -0.52
CUX2-201ENST00000261726 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
CUX2-201ENST00000261726 LURAP1LQ8IV03 231 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 TRAV8-3A0A0A6YYJ7 113 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 SPATA31B1PQ5VZV4 182 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 RASL10AQ92737 203 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 IGHV1-46P01743 117 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 SUMO4Q6EEV6 95 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 IGHV2-26A0A0B4J1V2 119 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 DUTP33316 252 aaKnown RBP11.79□□□□□ -0.52
CUX2-201ENST00000261726 WFDC1Q9HC57 220 aa11.79□□□□□ -0.52
CUX2-201ENST00000261726 APC2O95996 2303 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 IGFL4Q6B9Z1 124 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
CUX2-201ENST00000261726 TIMP3P35625 211 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 IGFBP3P17936 291 aaPredicted RBP11.78□□□□□ -0.52
CUX2-201ENST00000261726 A0A087WV48 116 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 LOC105371267A0A1B0GV96 52 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 ZNF319Q9P2F9 582 aa11.78□□□□□ -0.52
CUX2-201ENST00000261726 ARHGEF17Q96PE2 2063 aaPredicted RBP11.78□□□□□ -0.52
CUX2-201ENST00000261726 NDUFAF3Q9BU61 184 aa11.77□□□□□ -0.52
CUX2-201ENST00000261726 SLC25A39Q9BZJ4 359 aaPredicted RBP11.77□□□□□ -0.52
CUX2-201ENST00000261726 LEPROTO15243 131 aa11.77□□□□□ -0.52
CUX2-201ENST00000261726 GAGE2AQ6NT46 116 aa11.77□□□□□ -0.52
CUX2-201ENST00000261726 TEX38Q6PEX7 206 aa11.77□□□□□ -0.52
CUX2-201ENST00000261726 LINC00271P0C7V0 271 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 ESDP10768 282 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 Q8TAT8 98 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 BCL6BQ8N143 479 aaPredicted RBP11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BKO60814 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BJP06899 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 PSG1P11464 419 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BOP23527 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BBP33778 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BDP58876 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BCP62807 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 ZNF672Q499Z4 452 aaPredicted RBP11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.53
CUX2-201ENST00000261726 LCNL1Q6ZST4 164 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 PINLYPA6NC86 204 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 KLHL30-AS1Q8NEE0 82 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 CSTL1Q9H114 145 aa11.77□□□□□ -0.53
CUX2-201ENST00000261726 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 FOXF2Q12947 444 aa11.76□□□□□ -0.53
CUX2-201ENST00000261726 SCN5AQ14524 2016 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms