RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FAM159AQ6UWV7 190 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 ID1P41134 155 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 GUSBP1Q15486 140 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 VENTXO95231 258 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 NDPQ00604 133 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 TMEM250H0YL14 139 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 SPRY2O43597 315 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 EFNB3Q15768 340 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 ANXA2RQ3ZCQ2 193 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 BEND2Q8NDZ0 799 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 PKIBQ9C010 78 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 HTN3P15516 51 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 C1orf194Q5T5A4 169 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 SMRP1Q8NCR6 262 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 NDUFS8O00217 210 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 KLF2Q9Y5W3 355 aaPredicted RBP6.24□□□□□ -1.41
RIF1-201ENST00000243326 DDB2Q92466 427 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 GDF15Q99988 308 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 PLXND1Q9Y4D7 1925 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 LOC105371242A0A075B767 164 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 SYT8Q8NBV8 401 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 ITLN2Q8WWU7 325 aaPredicted RBP6.24□□□□□ -1.41
RIF1-201ENST00000243326 NTF4P34130 210 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 ZNF815PA8K554 130 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 COX5BP10606 129 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 SELENOTP62341 195 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 OR2K2Q8NGT1 345 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
RIF1-201ENST00000243326 TRGV3P03979 118 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 IGHV1-2P23083 117 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 ZNF114Q8NC26 417 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 TET2Q6N021 2002 aaPredicted RBP6.23□□□□□ -1.41
RIF1-201ENST00000243326 RRN3P1Q2M238 152 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 RALGAPA2Q2PPJ7 1873 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 WBP1Q96G27 269 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 DUX3Q96PT4 197 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 TRBV6-7A0A0A0MS04 114 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 C10orf128Q5T292 105 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
RIF1-201ENST00000243326 C3orf56Q8N813 242 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 CHTOPQ9Y3Y2 248 aaKnown RBP6.23□□□□□ -1.41
RIF1-201ENST00000243326 EFNA2O43921 213 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 Q6ZWC4 215 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 ASCL5Q7RTU5 278 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 D6R8Y8 96 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 PCDH15Q96QU1 1955 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 IGHV3-53P01767 116 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 RPP25LQ8N5L8 163 aaKnown RBP6.23□□□□□ -1.41
RIF1-201ENST00000243326 FAM106CPP0CH98 169 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 PAX2Q02962 417 aa6.23□□□□□ -1.41
RIF1-201ENST00000243326 BRWD3Q6RI45 1802 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 PRRC2CQ9Y520 2896 aaKnown RBP6.22□□□□□ -1.41
RIF1-201ENST00000243326 KBTBD11-OT1A0A1B0GTJ5 212 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 DPM2O94777 84 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 FAM90A26D6RGX4 464 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 LINC01551Q86U37 167 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 JPT1Q9UK76 154 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
RIF1-201ENST00000243326 BSPH1Q075Z2 132 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 ERCC8Q13216 396 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 C20orf204Q6ZNR8 217 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 LINC00114Q6XXX2 140 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 Q6ZRM9 215 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 MRPL32Q9BYC8 188 aaKnown RBP6.22□□□□□ -1.41
RIF1-201ENST00000243326 IGHV2OR16-5A0A0B4J2B6 119 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 PILRBQ9UKJ0 227 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 ASIPP42127 132 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 IGKCP01834 107 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
RIF1-201ENST00000243326 MOB4Q9Y3A3 225 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 IGHV1-69-2A0A0G2JMI3 117 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 UPK2O00526 184 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 TMEM219Q86XT9 240 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 PSG8Q9UQ74 426 aa6.22□□□□□ -1.41
RIF1-201ENST00000243326 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
RIF1-201ENST00000243326 TMEM213A2RRL7 107 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 PRR33A8MZF0 331 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 ESDP10768 282 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 TEX29Q8N6K0 151 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 SLX1AQ9BQ83 275 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 C1RLQ9NZP8 487 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 PTGDSP41222 190 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 NEGR1Q7Z3B1 354 aa6.21□□□□□ -1.41
RIF1-201ENST00000243326 TSSC4Q9Y5U2 329 aaPredicted RBP6.21□□□□□ -1.41
RIF1-201ENST00000243326 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 SAXO1Q8IYX7 474 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 FDCSPQ8NFU4 85 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 CYSLTR1Q9Y271 337 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 NPIPB6E9PJ23 425 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 ID3Q02535 119 aa6.21□□□□□ -1.42
RIF1-201ENST00000243326 ASCL4Q6XD76 172 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms