RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ZNF816Q0VGE8 651 aaPredicted RBP16.17■□□□□ 0.18
HOXC13-201ENST00000243056 TREML4Q6UXN2 200 aa16.17■□□□□ 0.18
HOXC13-201ENST00000243056 C1orf122Q6ZSJ8 110 aa16.17■□□□□ 0.18
HOXC13-201ENST00000243056 DRAM1Q8N682 238 aa16.17■□□□□ 0.18
HOXC13-201ENST00000243056 WDR31Q8NA23 367 aa16.17■□□□□ 0.18
HOXC13-201ENST00000243056 NHLRC2Q8NBF2 726 aa16.17■□□□□ 0.18
HOXC13-201ENST00000243056 SPANXB1Q9NS25 103 aaPredicted RBP16.17■□□□□ 0.18
HOXC13-201ENST00000243056 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.17■□□□□ 0.18
HOXC13-201ENST00000243056 HEATR1Q9H583 2144 aaKnown RBP16.16■□□□□ 0.18
HOXC13-201ENST00000243056 CD24P25063 80 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 FGF12P61328 243 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 NUP35Q8NFH5 326 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 HIVEP3Q5T1R4 2406 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 CAMPP49913 170 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 FOXA3P55318 350 aaPredicted RBP16.16■□□□□ 0.18
HOXC13-201ENST00000243056 AESQ08117 197 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 KRTAP27-1Q3LI81 207 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 SSMEM1Q8WWF3 244 aa16.16■□□□□ 0.18
HOXC13-201ENST00000243056 FGF23Q9GZV9 251 aaPredicted RBP16.16■□□□□ 0.18
HOXC13-201ENST00000243056 PDLIM3Q53GG5 364 aaPredicted RBP16.15■□□□□ 0.18
HOXC13-201ENST00000243056 Q6ZR03 302 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 IGF2BP2-AS1Q96M15 143 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 MAP1LC3CQ9BXW4 147 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 SPTAN1Q13813 2472 aaKnown RBP16.15■□□□□ 0.18
HOXC13-201ENST00000243056 FCGR2BP31994 310 aaPredicted RBP16.15■□□□□ 0.18
HOXC13-201ENST00000243056 PLP2Q04941 152 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 ATP5G2Q06055 141 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 C5orf30Q96GV9 206 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 SPAG8Q99932 426 aaPredicted RBP16.15■□□□□ 0.18
HOXC13-201ENST00000243056 ESPL1Q14674 2120 aa16.15■□□□□ 0.18
HOXC13-201ENST00000243056 LINC01545Q5VT33 79 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 C18orf15Q96N68 181 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 SLC25A17O43808 307 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 EFNB3Q15768 340 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 TEX45Q8NA69 505 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 MS4A5Q9H3V2 200 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 PSG8Q9UQ74 426 aa16.14■□□□□ 0.17
HOXC13-201ENST00000243056 FLNCQ14315 2725 aa16.13■□□□□ 0.17
HOXC13-201ENST00000243056 SAMD5Q5TGI4 173 aa16.13■□□□□ 0.17
HOXC13-201ENST00000243056 CHCHD1Q96BP2 118 aaKnown RBP16.13■□□□□ 0.17
HOXC13-201ENST00000243056 ZNF355PQ9NSJ1 428 aa16.13■□□□□ 0.17
HOXC13-201ENST00000243056 TMEM116Q8NCL8 245 aa16.13■□□□□ 0.17
HOXC13-201ENST00000243056 NANOS1Q8WY41 292 aaKnown RBP16.13■□□□□ 0.17
HOXC13-201ENST00000243056 C1QTNF5Q9BXJ0 243 aa16.13■□□□□ 0.17
HOXC13-201ENST00000243056 MRPL16Q9NX20 251 aaKnown RBP16.13■□□□□ 0.17
HOXC13-201ENST00000243056 RPL30P62888 115 aaKnown RBP16.12■□□□□ 0.17
HOXC13-201ENST00000243056 WFDC2Q14508 124 aa16.12■□□□□ 0.17
HOXC13-201ENST00000243056 CDSNQ15517 529 aa16.12■□□□□ 0.17
HOXC13-201ENST00000243056 FZR1Q9UM11 496 aa16.12■□□□□ 0.17
HOXC13-201ENST00000243056 ZNF645Q8N7E2 425 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 C1orf159Q96HA4 380 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 PLCE1Q9P212 2302 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 TRBV6-6A0A0A6YYG2 114 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 NPIPB11E5RHQ5 1161 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 MPDU1O75352 247 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 RBMXL2O75526 392 aaKnown RBP16.11■□□□□ 0.17
HOXC13-201ENST00000243056 PLPPR2Q96GM1 343 aa16.11■□□□□ 0.17
HOXC13-201ENST00000243056 IGHV3-64DA0A0J9YX35 117 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 NCR2O95944 276 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 COLCA1Q6ZS62 124 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 JPT1Q9UK76 154 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 TRAV24A0A0B4J272 114 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 OR11H12B2RN74 326 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 OR11H1Q8NG94 326 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 OR11H2Q8NH07 326 aa16.1■□□□□ 0.17
HOXC13-201ENST00000243056 GGTLC3B5MD39 225 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 J3QR89 54 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 LIPFP07098 398 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 CECR9P0C854 216 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 ZNF138P52744 262 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 ALKBH6Q3KRA9 238 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 FAM162BQ5T6X4 162 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 MIR17HGQ75NE6 70 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 RNF183Q96D59 192 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 ZNF488Q96MN9 340 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 RALYQ9UKM9 306 aaKnown RBP16.09■□□□□ 0.17
HOXC13-201ENST00000243056 TIMM8BQ9Y5J9 83 aaPredicted RBP16.09■□□□□ 0.17
HOXC13-201ENST00000243056 CCL21O00585 134 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 IGHV3-7P01780 117 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 TCTAP57738 103 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 BRWD1-AS2P59051 145 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 CR1LQ2VPA4 569 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 VGLL1Q99990 258 aa16.09■□□□□ 0.17
HOXC13-201ENST00000243056 A0A1B0GXF2 115 aa16.08■□□□□ 0.17
HOXC13-201ENST00000243056 CRYGCP07315 174 aa16.08■□□□□ 0.17
HOXC13-201ENST00000243056 PSG5Q15238 335 aa16.08■□□□□ 0.17
HOXC13-201ENST00000243056 IDI2-AS1Q9NZ38 188 aa16.08■□□□□ 0.17
HOXC13-201ENST00000243056 CA6P23280 308 aa16.08■□□□□ 0.16
HOXC13-201ENST00000243056 INSL3P51460 131 aa16.08■□□□□ 0.16
HOXC13-201ENST00000243056 TIMM23BQ5SRD1 257 aa16.08■□□□□ 0.16
HOXC13-201ENST00000243056 SLC25A15Q9Y619 301 aa16.08■□□□□ 0.16
HOXC13-201ENST00000243056 PKDREJQ9NTG1 2253 aa16.08■□□□□ 0.16
HOXC13-201ENST00000243056 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
HOXC13-201ENST00000243056 PRB1P04280 392 aa16.07■□□□□ 0.16
HOXC13-201ENST00000243056 OR9G9P0C7N8 305 aa16.07■□□□□ 0.16
HOXC13-201ENST00000243056 GRNP28799 593 aaKnown RBP16.07■□□□□ 0.16
HOXC13-201ENST00000243056 HERV-K104P63124 156 aa16.07■□□□□ 0.16
HOXC13-201ENST00000243056 BOD1L2Q8IYS8 172 aa16.07■□□□□ 0.16
HOXC13-201ENST00000243056 MTURNQ8N3F0 131 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms