RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 JKAMPQ9P055 326 aa15.01□□□□□ -0.01
CPSF3-201ENST00000238112 SMG1Q96Q15 3661 aaKnown RBP15.01□□□□□ -0.01
CPSF3-201ENST00000238112 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
CPSF3-201ENST00000238112 GDF5OSQ5U4N7 250 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 ZNF841Q6ZN19 808 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 LHFPL4Q7Z7J7 247 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 GPR82Q96P67 336 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 MGAQ8IWI9 3026 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 IGHV3-21A0A0B4J1V1 117 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 CORTO00230 105 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 CA7P43166 264 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 CAMPP49913 170 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 BATFQ16520 125 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 PVRIGQ6DKI7 326 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 ATP5L2Q7Z4Y8 100 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 TMEM116Q8NCL8 245 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 ABHD17AQ96GS6 310 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 NGBQ9NPG2 151 aa15□□□□□ -0.01
CPSF3-201ENST00000238112 MAP1BP46821 2468 aaKnown RBP15□□□□□ -0.01
CPSF3-201ENST00000238112 CUL9Q8IWT3 2517 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 HSBP1O75506 76 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 KLF12Q9Y4X4 402 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 IGHV1-69-2A0A0G2JMI3 117 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 CNTFRP26992 372 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 CTRLP40313 264 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 C11orf42Q8N5U0 333 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 C5orf17Q8NAS9 161 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 TNFRSF14Q92956 283 aa14.99□□□□□ -0.01
CPSF3-201ENST00000238112 SSBP4Q9BWG4 385 aaPredicted RBP14.99□□□□□ -0.01
CPSF3-201ENST00000238112 E7EQL1 145 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 KLF5Q13887 457 aaPredicted RBP14.98□□□□□ -0.01
CPSF3-201ENST00000238112 FMC1Q96HJ9 113 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 IGHV2-26A0A0B4J1V2 119 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 SHISA9B4DS77 424 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 FAM87AP0C7U9 286 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 GPR6P46095 362 aaPredicted RBP14.98□□□□□ -0.01
CPSF3-201ENST00000238112 RPP21Q9H633 154 aaKnown RBP14.98□□□□□ -0.01
CPSF3-201ENST00000238112 SIGLEC9Q9Y336 463 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 INSIG2Q9Y5U4 225 aa14.98□□□□□ -0.01
CPSF3-201ENST00000238112 OR2J3O76001 311 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 GP9P14770 177 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 C8orf46Q8TAG6 207 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 ALKBH7Q9BT30 221 aaPredicted RBP14.97□□□□□ -0.01
CPSF3-201ENST00000238112 WNT10AQ9GZT5 417 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 UQCR10Q9UDW1 63 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 TOMM40O96008 361 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 CRYGBP07316 175 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 CASP6P55212 293 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 LEMD1Q68G75 181 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 RNASEKQ6P5S7 137 aaKnown RBP14.97□□□□□ -0.01
CPSF3-201ENST00000238112 PRSS33Q8NF86 280 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 OR2D3Q8NGH3 330 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 MLST8Q9BVC4 326 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 Q9H3A6 140 aa14.97□□□□□ -0.01
CPSF3-201ENST00000238112 A6NNC1 897 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 H3BTX0 84 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 M0R2Z0 102 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 P01737 135 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 DLX1P56177 255 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 HBBP68871 147 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 TCF24Q7RTU0 167 aa14.96□□□□□ -0.01
CPSF3-201ENST00000238112 RALYQ9UKM9 306 aaKnown RBP14.96□□□□□ -0.01
CPSF3-201ENST00000238112 F11RQ9Y624 299 aaKnown RBP14.96□□□□□ -0.01
CPSF3-201ENST00000238112 A0A1B0GXF2 115 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 A8MWL6 223 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 FOSL1P15407 271 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 PPP1R27Q86WC6 154 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 HIGD1AQ9Y241 93 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 PKDREJQ9NTG1 2253 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 IGHV1-3A0A0C4DH29 117 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 VWC2LB2RUY7 222 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 LTAP01374 205 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 TCRAP04437 139 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 PLP1P60201 277 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 PRB3Q04118 309 aaPredicted RBP14.95□□□□□ -0.02
CPSF3-201ENST00000238112 KLHDC1Q8N7A1 406 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 DAZAP1Q96EP5 407 aaKnown RBP14.95□□□□□ -0.02
CPSF3-201ENST00000238112 TXN2Q99757 166 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 CLEC7AQ9BXN2 247 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 GSX1Q9H4S2 264 aaPredicted RBP14.95□□□□□ -0.02
CPSF3-201ENST00000238112 ZNF835Q9Y2P0 537 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 PLXNB1O43157 2135 aa14.95□□□□□ -0.02
CPSF3-201ENST00000238112 FAM181BA6NEQ2 426 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 IGLV1-47P01700 117 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 LYZP61626 148 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 PMCHL1Q16048 86 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 CT83Q5H943 113 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 Q8NA96 180 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 ZGRF1Q86YA3 2104 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 BUB1B-PAK6H3BSN5 160 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 IGLC2P0DOY2 106 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 IGLC3P0DOY3 106 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 APOBEC3AP31941 199 aaPredicted RBP14.94□□□□□ -0.02
CPSF3-201ENST00000238112 PAX2Q02962 417 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 LINC00322Q6ZN03 302 aaPredicted RBP14.94□□□□□ -0.02
CPSF3-201ENST00000238112 TMEM208Q9BTX3 173 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 PRSS22Q9GZN4 317 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 LPAR2Q9HBW0 351 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 ZNF492Q9P255 531 aa14.94□□□□□ -0.02
CPSF3-201ENST00000238112 TEX22C9J3V5 150 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms