RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TM2D1Q9BX74 207 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 CHD8Q9HCK8 2581 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 GPR179Q6PRD1 2367 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 DEDDO75618 318 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 JTBO76095 146 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 FKBP2P26885 142 aaKnown RBP6.83□□□□□ -1.32
SPARC-201ENST00000231061 RPL13AP40429 203 aaKnown RBP6.83□□□□□ -1.32
SPARC-201ENST00000231061 RND2P52198 227 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 PIGYQ3MUY2 71 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 C10orf128Q5T292 105 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 CRIP3Q6Q6R5 217 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 PRSS22Q9GZN4 317 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 Q9UF83 564 aa6.83□□□□□ -1.32
SPARC-201ENST00000231061 CRYM-AS1A6NIL9 109 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 ZNF253O75346 499 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 GPX1P07203 203 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 CRYBB3P26998 211 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 CA7P43166 264 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 DSCR4P56555 118 aaPredicted RBP6.82□□□□□ -1.32
SPARC-201ENST00000231061 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
SPARC-201ENST00000231061 HERV-K104P61576 105 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 LYZL2Q7Z4W2 148 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 OR1L1Q8NH94 360 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 ZNF442Q9H7R0 627 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 CACNA1EQ15878 2313 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 MYO7BQ6PIF6 2116 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 NCOA6Q14686 2063 aaPredicted RBP6.82□□□□□ -1.32
SPARC-201ENST00000231061 SLC25A5P05141 298 aaKnown RBP6.82□□□□□ -1.32
SPARC-201ENST00000231061 LIFP15018 202 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 PFN2P35080 140 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 CD164Q04900 197 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 RSPO1Q2MKA7 263 aaPredicted RBP6.82□□□□□ -1.32
SPARC-201ENST00000231061 SPSB3Q6PJ21 355 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 FBXL14Q8N1E6 418 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 SRXN1Q9BYN0 137 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 NAA60Q9H7X0 242 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
SPARC-201ENST00000231061 PSMB3P49720 205 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
SPARC-201ENST00000231061 SPEM2Q0P670 501 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 Q8N976 141 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 VSIRQ9H7M9 311 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 KLF12Q9Y4X4 402 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 POLEQ07864 2286 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IGHG4P01861 327 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 ZNF32P17041 273 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 RND3P61587 244 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 SRYQ05066 204 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IL15RAQ13261 267 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IGFL2Q6UWQ7 119 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 RPS19BP1Q86WX3 136 aaKnown RBP6.81□□□□□ -1.32
SPARC-201ENST00000231061 SUMF1Q8NBK3 374 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 LIME1Q9H400 295 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 ZNF665Q9H7R5 613 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 ZNF286AQ9HBT8 521 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 YTHDF2Q9Y5A9 579 aaKnown RBP6.81□□□□□ -1.32
SPARC-201ENST00000231061 EXPH5Q8NEV8 1989 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 H3BRM9 83 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IGLV3-1P01715 115 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IGHV3-9P01782 118 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 AAED1Q7RTV5 226 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 CXXC4Q9H2H0 198 aa6.81□□□□□ -1.32
SPARC-201ENST00000231061 IGKV1-27A0A075B6S5 117 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 TRAV9-2A0A087WT02 112 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 IGHV1-45A0A0A0MS14 117 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 J3QQQ9 107 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 ZNHIT1O43257 154 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 ZIC3O60481 467 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 SRD5A1P18405 259 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 DUTP33316 252 aaKnown RBP6.8□□□□□ -1.32
SPARC-201ENST00000231061 PPP1CCP36873 323 aaKnown RBP6.8□□□□□ -1.32
SPARC-201ENST00000231061 Q56UQ5 140 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 SSBP3Q9BWW4 388 aaPredicted RBP6.8□□□□□ -1.32
SPARC-201ENST00000231061 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 MUC3AQ02505 3323 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 FAM186AA6NE01 2351 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 TRAV1-1A0A0B4J248 108 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 CD300LBA8K4G0 201 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 CCL4P13236 92 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 FAM27BQ5VT28 67 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 LINC00596Q86U02 117 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 LY6G6EA0A0G2JKS1 128 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 F8W1H4 67 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 GPR137BO60478 399 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 COX6A1P12074 109 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 TMEM187Q14656 261 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 OR4X2Q8NGF9 303 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 TMEM147Q9BVK8 224 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 PYGO1Q9Y3Y4 419 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 U3KQA8 63 aa6.8□□□□□ -1.32
SPARC-201ENST00000231061 ADAMTS9Q9P2N4 1935 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms