RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
LAMA4-201ENST00000230538 S100A7L2Q5SY68 101 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 IGKV1-12A0A0C4DH73 117 aa9.52□□□□□ -0.88
LAMA4-201ENST00000230538 SAP30O75446 220 aa9.52□□□□□ -0.88
LAMA4-201ENST00000230538 IGKV1D-12P01611 117 aa9.52□□□□□ -0.88
LAMA4-201ENST00000230538 C15orf32Q32M92 178 aa9.52□□□□□ -0.88
LAMA4-201ENST00000230538 CD300EQ496F6 205 aaPredicted RBP9.52□□□□□ -0.88
LAMA4-201ENST00000230538 MDC1Q14676 2089 aaKnown RBP9.52□□□□□ -0.89
LAMA4-201ENST00000230538 RP1P56715 2156 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 PMS2P5A8MQ11 134 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 KLRD1Q13241 179 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 RCHY1Q96PM5 261 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 TMEM8BA6NDV4 472 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 FAM166AQ6J272 317 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 GGNQ86UU5 652 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
LAMA4-201ENST00000230538 GGTLC3B5MD39 225 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 M0R2P5 195 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 CXCL1P09341 107 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 TIMP3P35625 211 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 NDUFAF3Q9BU61 184 aa9.52□□□□□ -0.89
LAMA4-201ENST00000230538 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.89
LAMA4-201ENST00000230538 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 UBE2CO00762 179 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 CKS1BP61024 79 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 TPTE2P1Q5T6R2 138 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 EXOC3-AS1Q8N2X6 119 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 IGKV1-27A0A075B6S5 117 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 NTN3O00634 580 aaPredicted RBP9.51□□□□□ -0.89
LAMA4-201ENST00000230538 SRSF6Q13247 344 aaKnown RBP9.51□□□□□ -0.89
LAMA4-201ENST00000230538 MORN3Q6PF18 240 aaPredicted RBP9.51□□□□□ -0.89
LAMA4-201ENST00000230538 HEPN1Q6WQI6 88 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
LAMA4-201ENST00000230538 PLSCR4Q9NRQ2 329 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 SEC16AO15027 2179 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 PSG1P11464 419 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 SRRM5B3KS81 715 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 NPC2P61916 151 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 NABP1Q96AH0 204 aa9.51□□□□□ -0.89
LAMA4-201ENST00000230538 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 FOXG1P55316 489 aaPredicted RBP9.5□□□□□ -0.89
LAMA4-201ENST00000230538 MGST2Q99735 147 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 EFNA2O43921 213 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 NCR2O95944 276 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 SELLP14151 372 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 EFNA4P52798 201 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 A6NNC1 897 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 TMEM178BH3BS89 294 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 CD59P13987 128 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 HSD52Q0P140 79 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 CST9LQ9H4G1 147 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 A8MWV9 139 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 D6R8Y8 96 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 CYTL1Q9NRR1 136 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 SMPXQ9UHP9 88 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
LAMA4-201ENST00000230538 CLPSP04118 112 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 MST1P26927 711 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 HGFACQ04756 655 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 IL18BPO95998 194 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 SLC25A48Q6ZT89 311 aaKnown RBP9.49□□□□□ -0.89
LAMA4-201ENST00000230538 C5orf24Q7Z6I8 188 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 MINOS1Q5TGZ0 78 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 MINOS1-NBL1R4GNA1 71 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 GBF1Q92538 1859 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 A0A1B0GWJ7 208 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 TMEM190Q8WZ59 177 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 TRGV9Q99603 122 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 ANK1P16157 1881 aa9.49□□□□□ -0.89
LAMA4-201ENST00000230538 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 LYZL1Q6UWQ5 148 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 MS4A6AQ9H2W1 248 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 SVILO95425 2214 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 A0A087WX48 190 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 HIST1H2BLQ99880 126 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 ASXL3Q9C0F0 2248 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 FXYD7P58549 80 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 SPSB3Q6PJ21 355 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms