RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ACTL10Q5JWF8 245 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 FAM209BQ5JX69 171 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 PIP4P1Q86T03 277 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 ZNF414Q96IQ9 312 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 SCRT1Q9BWW7 348 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 MALP21145 153 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 PKIAP61925 76 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 ZNF407Q9C0G0 2248 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 LINC00473A8K010 186 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 PHF3Q92576 2039 aaKnown RBP15.11■□□□□ 0.01
CLIP2-201ENST00000223398 IFITM2Q01629 132 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 PMCHL1Q16048 86 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 TMEM183AQ8IXX5 376 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 FOXC2Q99958 501 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 VSIRQ9H7M9 311 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 BDP1A6H8Y1 2624 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 IGHV3-73A0A0B4J1V6 119 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 H0YIZ8 118 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 SSBP4Q9BWG4 385 aaPredicted RBP15.1■□□□□ 0.01
CLIP2-201ENST00000223398 PGPEP1LA6NFU8 196 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 CFAP161Q6P656 301 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 IL17RELQ6ZVW7 336 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 CLDN16Q9Y5I7 305 aa15.1■□□□□ 0.01
CLIP2-201ENST00000223398 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 PROK2Q9HC23 129 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 SIP14410 1827 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 NPIPB5A8MRT5 1133 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 NDUFS8O00217 210 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 WISP1O95388 367 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 DEFB104AQ8WTQ1 72 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 TNFSF13O75888 250 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 LY6G6FQ5SQ64 297 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 TREML4Q6UXN2 200 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 OR11H12B2RN74 326 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 SOD3P08294 240 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 IGFL4Q6B9Z1 124 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 EXOC3-AS1Q8N2X6 119 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 OR11H1Q8NG94 326 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 OR11H2Q8NH07 326 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 JKAMPQ9P055 326 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 TBL2Q9Y4P3 447 aaKnown RBP15.09■□□□□ 0.01
CLIP2-201ENST00000223398 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 WNK2Q9Y3S1 2297 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 NAPSAO96009 420 aa15.09■□□□□ 0.01
CLIP2-201ENST00000223398 PCNX1Q96RV3 2341 aa15.08■□□□□ 0.01
CLIP2-201ENST00000223398 FAM90A9PA6NNJ1 464 aa15.08■□□□□ 0.01
CLIP2-201ENST00000223398 SPATA31B1PQ5VZV4 182 aa15.08■□□□□ 0.01
CLIP2-201ENST00000223398 FCN3O75636 299 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 HS3ST6Q96QI5 342 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 SIGLEC9Q9Y336 463 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 WFDC1Q9HC57 220 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 A0A1B0GWJ7 208 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 IGHV3-53P01767 116 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 RPLP1P05386 114 aaKnown RBP15.08■□□□□ 0
CLIP2-201ENST00000223398 SLC25A34Q6PIV7 304 aa15.08■□□□□ 0
CLIP2-201ENST00000223398 OVOL1O14753 267 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 CR1LQ2VPA4 569 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 CHCHD5Q9BSY4 110 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 MUC6Q6W4X9 2439 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 PRTN3P24158 256 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 ORMDL3Q8N138 153 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 ST20Q9HBF5 79 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 SYNJ2BPP57105 145 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 WDR83OSQ9Y284 106 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 TRGV11A0A075B6L2 103 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 K7EM74 188 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 ARTNQ5T4W7 220 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 FAM169BQ8N8A8 192 aa15.07■□□□□ 0
CLIP2-201ENST00000223398 SNAI2O43623 268 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 CRPP02741 224 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 STAG3L2P0CL84 134 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 OR9G4Q8NGQ1 327 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 MPDZO75970 2070 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 NDUFA3O95167 84 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 IGKV1-5P01602 117 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 COPS9Q8WXC6 57 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 RNF114Q9Y508 228 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 KIAA2026Q5HYC2 2103 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 SLC25A39Q9BZJ4 359 aaPredicted RBP15.06■□□□□ 0
CLIP2-201ENST00000223398 ABCA1O95477 2261 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 EVI2AP22794 236 aa15.06■□□□□ 0
CLIP2-201ENST00000223398 WT1P19544 449 aaPredicted RBP15.06■□□□□ 0
CLIP2-201ENST00000223398 SOX21Q9Y651 276 aaPredicted RBP15.06■□□□□ 0
CLIP2-201ENST00000223398 RNF5Q99942 180 aa15.05■□□□□ 0
CLIP2-201ENST00000223398 IGKV1-16P04430 117 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 CEACAM8P31997 349 aaPredicted RBP15.05■□□□□ -0
CLIP2-201ENST00000223398 PRR31Q5SQ13 230 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 Q6AWC8 147 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 TTC28Q96AY4 2481 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 IZUMO1RA6ND01 250 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 H3BRM9 83 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 OVOL3O00110 214 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 FAM19A2Q8N3H0 131 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 BEND2Q8NDZ0 799 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 TRAV12-3A0A0B4J271 114 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 CCL20P78556 96 aa15.05■□□□□ -0
CLIP2-201ENST00000223398 TRBV7-1A0A0A6YYK4 115 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 RPL23P62829 140 aaKnown RBP15.04■□□□□ -0
CLIP2-201ENST00000223398 DUX4L9Q6RFH8 374 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms