RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 UBR5O95071 2799 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 MYO18BQ8IUG5 2567 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 A0A0U1RQK1 487 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 LINC01356Q8N9X3 169 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 VN1R17PQ8TDU5 208 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
RTFDC1-201ENST00000023939 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 IGHV3OR16-10A0A075B7F0 116 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 WI2-2373I1.2A0A1W2PRP0 233 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 H7BYZ3 331 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 J3QLI3 93 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 PYYP10082 97 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 MYCNOSP40205 109 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 LOXL1Q08397 574 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 BRD3OSQ6XYD6 125 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 C16orf82Q7Z2V1 217 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 C21orf62Q9NYP8 219 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 PPP1R2P9O14990 202 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 NDUFB8O95169 186 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 GP9P14770 177 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 CRYBB3P26998 211 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 RPL35P42766 123 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 RAB5BP61020 215 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 SSX3Q99909 188 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 ELOVL1Q9BW60 279 aa11.23□□□□□ -0.61
RTFDC1-201ENST00000023939 TRBV9A0A0B4J1U6 114 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 TGOLN2O43493 480 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 GNG7O60262 68 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 SCGB2A1O75556 95 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 CXCL1P09341 107 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 LYZP61626 148 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 UNQ5815/PRO19632Q6UWF5 114 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 ZNF491Q8N8L2 437 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-201ENST00000023939 A6NDX4 124 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 HELTA6NFD8 242 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 OR2J3O76001 311 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 AMY1AP04745 511 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 C19orf54Q5BKX5 351 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 OCC1Q8TAD7 63 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 RNF125Q96EQ8 232 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 IMMP2LQ96T52 175 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 TMUB1Q9BVT8 246 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 URGCP-MRPS24S4R325 110 aa11.21□□□□□ -0.61
RTFDC1-201ENST00000023939 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 TAS2R60P59551 318 aa11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 KRTAP10-9P60411 292 aa11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 OR5B12Q96R08 314 aa11.21□□□□□ -0.62
RTFDC1-201ENST00000023939 H3BRN7 92 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 M0QZK8 103 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 AVPP01185 164 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 S100PP25815 95 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 GALR1P47211 349 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 Q56UQ5 140 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 ATP6V0BQ99437 205 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 CDC42EP3Q9UKI2 254 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
RTFDC1-201ENST00000023939 SPG11Q96JI7 2443 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 BRI3O95415 125 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 GNG4P50150 75 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 TMEM219Q86XT9 240 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 GAR1Q9NY12 217 aaKnown RBP11.19□□□□□ -0.62
RTFDC1-201ENST00000023939 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 PGPEP1LA6NFU8 196 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 IGF1P05019 195 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 IL4P05112 153 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 CTSGP08311 255 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 COL8A1P27658 744 aa11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 RPS10P46783 165 aaKnown RBP11.18□□□□□ -0.62
RTFDC1-201ENST00000023939 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms