RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 M0R1W7 72 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 INSL4Q14641 139 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 RASL10AQ92737 203 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 IGHG4P01861 327 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 IGKV3-11P04433 115 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 FOXI3A8MTJ6 420 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 UMODP07911 640 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 ICAM4Q14773 271 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 BHLHA9Q7RTU4 235 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 SMIM14Q96QK8 99 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 A0A0G2JMM0 328 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 A0A1W2PPB8 328 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 KIR3DP1A8MWS1 328 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 CCL8P80075 99 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 LDLRAD2Q5SZI1 272 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 EPDR1Q9UM22 224 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 RPL36AP83881 106 aaKnown RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 IL15RAQ13261 267 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 SH2D6Q7Z4S9 175 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 RPL36ALQ969Q0 106 aaKnown RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 RNF222A6NCQ9 220 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 SIVA1O15304 175 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 PRKNO60260 465 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 STHQ8IWL8 128 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 SLC25A28Q96A46 364 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 MRPL20Q9BYC9 149 aaKnown RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 MLNRO43193 412 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 KLK2P20151 261 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 EIF4EBP2Q13542 120 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-201ENST00000011700 SIGLEC15Q6ZMC9 328 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 TEX48A0A1B0GUV7 120 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 M0R381 172 aa5.1□□□□□ -1.59
VPS13D-201ENST00000011700 A0A1W2PPE3 182 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 RUNX1Q01196 453 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 TAL2Q16559 108 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-201ENST00000011700 SPATA25Q9BR10 227 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 IGHV1-24A0A0C4DH33 117 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 CCL2P13500 99 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 IL17DQ8TAD2 202 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 RPUSD1Q9UJJ7 312 aaKnown RBP5.09□□□□□ -1.59
VPS13D-201ENST00000011700 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 FOXS1O43638 330 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 ITGBL1O95965 494 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-201ENST00000011700 SMIM10L1P0DMW3 83 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 ACTL10Q5JWF8 245 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 SMIM10Q96HG1 83 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 CCL13Q99616 98 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 ABCA12Q86UK0 2595 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 ZIC3O60481 467 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 INSP01308 110 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF124Q15973 351 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 OR13A1Q8NGR1 328 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 FZR1Q9UM11 496 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 HILPDAQ9Y5L2 63 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 F11RQ9Y624 299 aaKnown RBP5.09□□□□□ -1.59
VPS13D-201ENST00000011700 IGHV3-64DA0A0J9YX35 117 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 FAM60AQ9NP50 221 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 TMSB15BA0A087X1C1 80 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 MEX3AA1L020 520 aaKnown RBP5.09□□□□□ -1.59
VPS13D-201ENST00000011700 TMEM75Q8N9X5 138 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 WFDC6Q9BQY6 131 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 MTORP42345 2549 aa5.09□□□□□ -1.59
VPS13D-201ENST00000011700 TRAV14DV4A0A0A6YYC5 116 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 TRAV13-2A0A0B4J235 113 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 LHX2P50458 406 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 PLAURQ03405 335 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 NPIPB3Q92617 1050 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 C18orf12Q96KH6 178 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM133Q9H2Q1 129 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 BEX4Q9NWD9 120 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-201ENST00000011700 SPTBN4Q9H254 2564 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 A0A0J9YW62 118 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 ANKRD34AQ69YU3 496 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 TEX38Q6PEX7 206 aa5.09□□□□□ -1.6
VPS13D-201ENST00000011700 SPANXB1Q9NS25 103 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-201ENST00000011700 LOC102724200A0A096LPH7 203 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 SS18Q15532 418 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 DTX4Q9Y2E6 619 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 LTBP1Q14766 1721 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 NDUFC2O95298 119 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 HCP5Q6MZN7 132 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 FAM89BQ8N5H3 189 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 UCN2Q96RP3 112 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 FGF16O43320 207 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 COL9A2Q14055 689 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 PRSS41Q7RTY9 318 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 LY6G5BQ8NDX9 201 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 SOCS3O14543 225 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 CD5LO43866 347 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 CD7P09564 240 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 RNASE6Q93091 150 aaKnown RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 MCRIP2Q9BUT9 160 aaKnown RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 SELLP14151 372 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 SLC25A16P16260 332 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM95Q3KNT9 176 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 STPG1Q5TH74 334 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 A0A087WX48 190 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ADARB2-AS1A8MUL3 147 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms