RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PHOX2AO14813 284 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 IGKV1-13P0DP09 117 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 PI3P19957 117 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 P2RY1P47900 373 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 RAB7AP51149 207 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 TMEM30BQ3MIR4 351 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 KHDC3LQ587J8 217 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 SLC24A4Q8NFF2 622 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 OR52L2PQ8NGH6 319 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 RFESDQ8TAC1 157 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 GNPNAT1Q96EK6 184 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-212ENST00000641247 FAM210BQ96KR6 192 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 RHOVQ96L33 236 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 CALYQ9NYX4 217 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 JPT1Q9UK76 154 aa7.4□□□□□ -1.22
PHGDH-212ENST00000641247 RBFOX3A6NFN3 312 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 CCSO14618 274 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 SOX15O60248 233 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BKO60814 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BJP06899 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 OR8U9P0C7N5 309 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 FABP4P15090 132 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BOP23527 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 GNRHRP30968 328 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BBP33778 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 RND2P52198 227 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 PIGPP57054 158 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BDP58876 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BCP62807 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 EWSR1Q01844 656 aaKnown RBP eCLIP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 ZNF816Q0VGE8 651 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST2H2BEQ16778 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 RPL7L1Q6DKI1 246 aaKnown RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 SMIM15Q7Z3B0 74 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 CCDC71LQ8N9Z2 235 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 OR10A7Q8NGE5 316 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 BSCL2Q96G97 398 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 ABHD14BQ96IU4 210 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 RITA1Q96K30 269 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 RASL11BQ9BPW5 248 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 SLC25A31Q9H0C2 315 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 CCL28Q9NRJ3 127 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 SLC2A9Q9NRM0 540 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 LYRM2Q9NU23 88 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 IDI2-AS1Q9NZ38 188 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 GNG12Q9UBI6 72 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 RNF150Q9ULK6 438 aa7.39□□□□□ -1.23
PHGDH-212ENST00000641247 PUS1Q9Y606 427 aaKnown RBP eCLIP7.39□□□□□ -1.23
PHGDH-212ENST00000641247 CRYM-AS1A6NIL9 109 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 H3BQ15 152 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 HSD17B6O14756 317 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 AGPAT2O15120 278 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 CYB5BO43169 146 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 YPEL1O60688 119 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 IFNA1P01562 189 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 OR10J1P30954 320 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 S100A10P60903 97 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 RND3P61587 244 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 SUPT4H1P63272 117 aaKnown RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 SRPXP78539 464 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 GNMTQ14749 295 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 ELOBQ15370 118 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 MSMO1Q15800 293 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 PHLDA2Q53GA4 152 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 C1orf194Q5T5A4 169 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 ZNF818PQ6ZRF7 136 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 CMTM1Q8IZ96 169 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 OR5T1Q8NG75 326 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 OR52M1Q8NGK5 317 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 OR2T10Q8NGZ9 312 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 DTD1Q8TEA8 209 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 RTN4IP1Q8WWV3 396 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 ISOC2Q96AB3 205 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 YPEL2Q96QA6 119 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 PARP12Q9H0J9 701 aaKnown RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 SRD5A3Q9H8P0 318 aa7.38□□□□□ -1.23
PHGDH-212ENST00000641247 AMMECR1Q9Y4X0 333 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 RBM7Q9Y580 266 aaKnown RBP7.38□□□□□ -1.23
PHGDH-212ENST00000641247 IGHV3-43A0A0B4J1X8 118 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 A0A1W2PN81 502 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 IZUMO1RA6ND01 250 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 ATP6V0E1O15342 81 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 MPPED1O15442 326 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 IGLV2-14P01704 120 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 IGHV3-11P01762 117 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 RD3LP0DJH9 198 aa7.37□□□□□ -1.23
PHGDH-212ENST00000641247 IGHV3-43DP0DP04 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms