RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 RNASE7Q9H1E1 156 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 MED13LQ71F56 2210 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 TFF1P04155 84 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 ZNF146Q15072 292 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 GAGE13Q4V321 117 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 GAGE2AQ6NT46 116 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 NMBP08949 121 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 BRD3OSQ6XYD6 125 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 A8MWV9 139 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 ZP1P60852 638 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 C6orf226Q5I0X4 101 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 PKIBQ9C010 78 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
CACNA1A-258ENST00000638029 PLNP26678 52 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 DEFB105AQ8NG35 78 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 FAM57AQ8TBR7 257 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 TCF19Q9Y242 345 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 TRAV8-3A0A0A6YYJ7 113 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 RHOGP84095 191 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 CEACAM1P13688 526 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 NDPQ00604 133 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 CELA3AP09093 270 aa13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 FOXD3Q9UJU5 478 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-258ENST00000638029 MGAMO43451 1857 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 TMEM91Q6ZNR0 172 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 DSCAML1Q8TD84 2053 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 A0A096LPF7 62 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 UMODP07911 640 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 ATXN8Q156A1 80 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 ZNF329Q86UD4 541 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 USF3Q68DE3 2245 aa13.71□□□□□ -0.21
CACNA1A-258ENST00000638029 SNHG12Q9BXW3 62 aa13.71□□□□□ -0.22
CACNA1A-258ENST00000638029 TRAV41A0A0B4J266 112 aa13.71□□□□□ -0.22
CACNA1A-258ENST00000638029 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.22
CACNA1A-258ENST00000638029 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.22
CACNA1A-258ENST00000638029 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 DMRTC2Q8IXT2 367 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 FAM216BQ8N7L0 139 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 IMMP1LQ96LU5 166 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 CELA3BP08861 270 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 PLSCR4Q9NRQ2 329 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 LOC105371267A0A1B0GV96 52 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 ADMP35318 185 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 KLRD1Q13241 179 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 SLC25A47Q6Q0C1 308 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 CD160O95971 181 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 FOXL1Q12952 345 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 SIGLEC15Q6ZMC9 328 aa13.7□□□□□ -0.22
CACNA1A-258ENST00000638029 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 RPP21Q9H633 154 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 COX6A1P12074 109 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 ZNF729A6NN14 1252 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 JPT1Q9UK76 154 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 KIAA1549Q9HCM3 1950 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 WNT2P09544 360 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 NKAPP1Q8N9T2 125 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 FMC1Q96HJ9 113 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 NGFRP08138 427 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 CCL3L1P16619 93 aa13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 C8orf82Q6P1X6 216 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-258ENST00000638029 RNASE6Q93091 150 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 PQLC2LA1A4F0 135 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 THBDP07204 575 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 MIR17HGQ75NE6 70 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 NPIPB13A6NJU9 1138 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 NPIPB5A8MRT5 1133 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 F8VVB4 439 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 F8VWA3 439 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 FSTP19883 344 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 PAX8Q06710 450 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 OR52E5Q8NH55 327 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 LINC00477Q96M19 166 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 LHFPL6Q9Y693 200 aa13.68□□□□□ -0.22
CACNA1A-258ENST00000638029 IGKV2-40A0A087WW87 121 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 IGKV2D-40P01614 121 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 SSBP2P81877 361 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 SAXO1Q8IYX7 474 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 ERCC8Q13216 396 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 TIAF1O95411 115 aa13.67□□□□□ -0.22
CACNA1A-258ENST00000638029 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms