RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MS4A6AQ9H2W1 248 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 SHPKQ9UHJ6 478 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 A0A0J9YWU9 116 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 CXorf65A6NEN9 183 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 RND2P52198 227 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 TNFRSF9Q07011 255 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 TIGITQ495A1 244 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 MRPL36Q9P0J6 103 aaKnown RBP14.01□□□□□ -0.17
CLN6-221ENST00000637494 DNAH7Q8WXX0 4024 aa14.01□□□□□ -0.17
CLN6-221ENST00000637494 CRYBB3P26998 211 aa14□□□□□ -0.17
CLN6-221ENST00000637494 OR10J1P30954 320 aa14□□□□□ -0.17
CLN6-221ENST00000637494 PRSS54Q6PEW0 395 aa14□□□□□ -0.17
CLN6-221ENST00000637494 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
CLN6-221ENST00000637494 OR1S1Q8NH92 325 aa14□□□□□ -0.17
CLN6-221ENST00000637494 DTD1Q8TEA8 209 aa14□□□□□ -0.17
CLN6-221ENST00000637494 GATAD1Q8WUU5 269 aa14□□□□□ -0.17
CLN6-221ENST00000637494 U3KQ87 197 aa14□□□□□ -0.17
CLN6-221ENST00000637494 IGKV1-17P01599 117 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 P2RY1P47900 373 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 DEFB131AP59861 70 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 YPEL3P61236 119 aaPredicted RBP13.99□□□□□ -0.17
CLN6-221ENST00000637494 ZNF124Q15973 351 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 NMSQ5H8A3 153 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 LYZL2Q7Z4W2 148 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 TMED4Q7Z7H5 227 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 DEDD2Q8WXF8 326 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 PRR13Q9NZ81 148 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 HSPB7Q9UBY9 170 aa13.99□□□□□ -0.17
CLN6-221ENST00000637494 DUXBA0A1W2PPF3 345 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 NUPR2A6NF83 97 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 HELTA6NFD8 242 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 HNRNPCP07910 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLN6-221ENST00000637494 IGLC1P0CG04 106 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 ATP5IP56385 69 aaPredicted RBP13.98□□□□□ -0.17
CLN6-221ENST00000637494 PMS2P11Q13670 270 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 KLF9Q13886 244 aaPredicted RBP13.98□□□□□ -0.17
CLN6-221ENST00000637494 TMEM128Q5BJH2 165 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 STHQ8IWL8 128 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 LILRB2Q8N423 598 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 ACY3Q96HD9 319 aa13.98□□□□□ -0.17
CLN6-221ENST00000637494 SLC25A21Q9BQT8 299 aaPredicted RBP13.98□□□□□ -0.17
CLN6-221ENST00000637494 IFNA4P05014 189 aa13.97□□□□□ -0.17
CLN6-221ENST00000637494 ATF4P18848 351 aaPredicted RBP13.97□□□□□ -0.17
CLN6-221ENST00000637494 INPP1P49441 399 aa13.97□□□□□ -0.17
CLN6-221ENST00000637494 AP2S1P53680 142 aaPredicted RBP13.97□□□□□ -0.17
CLN6-221ENST00000637494 SUPT4H1P63272 117 aaKnown RBP13.97□□□□□ -0.17
CLN6-221ENST00000637494 RBKSQ9H477 322 aa13.97□□□□□ -0.17
CLN6-221ENST00000637494 RD3LP0DJH9 198 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 VAMP1P23763 118 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 SPANXN2Q5MJ10 180 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 LEMD1Q68G75 181 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 NPIPB3Q92617 1050 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 TRIM63Q969Q1 353 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 RARRES2Q99969 163 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 PFDN2Q9UHV9 154 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 V9GYH0 126 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 TENM2Q9NT68 2774 aa13.96□□□□□ -0.17
CLN6-221ENST00000637494 K7EQG2 157 aa13.95□□□□□ -0.18
CLN6-221ENST00000637494 CA1P00915 261 aaPredicted RBP13.95□□□□□ -0.18
CLN6-221ENST00000637494 IL4P05112 153 aa13.95□□□□□ -0.18
CLN6-221ENST00000637494 RBMS2Q15434 407 aaKnown RBP13.95□□□□□ -0.18
CLN6-221ENST00000637494 MED6O75586 246 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 TOMM40O96008 361 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 FABP1P07148 127 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
CLN6-221ENST00000637494 RAB11AP62491 216 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 DHRS2Q13268 280 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 TMEM170AQ8WVE7 144 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 SLC35E1Q96K37 410 aa13.94□□□□□ -0.18
CLN6-221ENST00000637494 KLK5Q9Y337 293 aaPredicted RBP13.94□□□□□ -0.18
CLN6-221ENST00000637494 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
CLN6-221ENST00000637494 C16orf54Q6UWD8 224 aa13.93□□□□□ -0.18
CLN6-221ENST00000637494 OR11H2Q8NH07 326 aa13.93□□□□□ -0.18
CLN6-221ENST00000637494 ZFP92A6NM28 416 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 ZNF701M0R085 212 aaPredicted RBP13.92□□□□□ -0.18
CLN6-221ENST00000637494 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 SLC25A6P12236 298 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
CLN6-221ENST00000637494 RPP30P78346 268 aaKnown RBP13.92□□□□□ -0.18
CLN6-221ENST00000637494 ZNF79Q15937 498 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 CCDC190Q86UF4 302 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 CENPSQ8N2Z9 138 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 FAM24BQ8N5W8 94 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 OR51G1Q8NGK1 321 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 CIB3Q96Q77 187 aaPredicted RBP13.92□□□□□ -0.18
CLN6-221ENST00000637494 PAIP2BQ9ULR5 123 aaKnown RBP13.92□□□□□ -0.18
CLN6-221ENST00000637494 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 U3KQE9 123 aa13.92□□□□□ -0.18
CLN6-221ENST00000637494 FAM90A26D6RGX4 464 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 SFT2D2O95562 160 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 SPP1P10451 314 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 PSG1P11464 419 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 SNRPD3P62318 126 aaKnown RBP13.91□□□□□ -0.18
CLN6-221ENST00000637494 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
CLN6-221ENST00000637494 TRIQKQ629K1 86 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 MORN3Q6PF18 240 aaPredicted RBP13.91□□□□□ -0.18
CLN6-221ENST00000637494 CEMP1Q6PRD7 247 aaPredicted RBP13.91□□□□□ -0.18
CLN6-221ENST00000637494 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
CLN6-221ENST00000637494 DCANP1Q8TF63 244 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms