RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	PRSS8	Q16651	343 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543		Q1RN00	199 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	ATOH7	Q8N100	152 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	MGST2	Q99735	147 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	PRORY	Q9H606	182 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	SELENOK	Q9Y6D0	94 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	IGHV3OR16-13	A0A075B7E8	117 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	IGHV3-74	A0A0B4J1X5	117 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	FAM90A9P	A6NNJ1	464 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	TPTE2P1	Q5T6R2	138 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	LEMD1	Q68G75	181 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	PLA2G2E	Q9NZK7	142 aa		10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.78	□□□□□ -0.68
NRXN1-233	ENST00000630543	LOC105371267	A0A1B0GV96	52 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	HELT	A6NFD8	242 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	PDE6D	O43924	150 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	SCGB1C2	P0DMR2	95 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	CRYBB3	P26998	211 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	CD69	Q07108	199 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	PNRC1	Q12796	327 aa	Predicted RBP	10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	TMEM144	Q7Z5S9	345 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	TMEM219	Q86XT9	240 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	GGACT	Q9BVM4	153 aa		10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	USP9Y	O00507	2555 aa	Predicted RBP	10.77	□□□□□ -0.68
NRXN1-233	ENST00000630543	CD5	P06127	495 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR8I2	Q8N0Y5	310 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543		Q8WTZ3	238 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	HIGD1A	Q9Y241	93 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	ITGB1BP1	O14713	200 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	SIAH2	O43255	324 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	TGFA	P01135	160 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	C8orf88	P0DMB2	117 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	SMDT1	Q9H4I9	107 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	C19orf84	I3L1E1	186 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	IGHV2-70	P01814	119 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	CSN1S1	P47710	185 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	ZNF833P	Q6ZTB9	187 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	ARL6IP6	Q8N6S5	226 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	TMEM167A	Q8TBQ9	72 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	NRGN	Q92686	78 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	TNFRSF14	Q92956	283 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	ZNF462	Q96JM2	2506 aa		10.77	□□□□□ -0.69
NRXN1-233	ENST00000630543	SELENOT	P62341	195 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	FA2H	Q7L5A8	372 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	TCF23	Q7RTU1	214 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	LINC00305	Q7Z4B0	112 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	RNF2	Q99496	336 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	NCOR1P1	Q9H4R4	102 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	SEPSECS	Q9HD40	501 aa	Known RBP	10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	KAAG1	Q9UBP8	84 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	ZNF257	Q9Y2Q1	563 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543		K7EQM0	130 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	FCGR2B	P31994	310 aa	Predicted RBP	10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	PLA2G5	P39877	138 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	ZNF137P	P52743	207 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	TMEM14B	Q9NUH8	114 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	DNASE2	O00115	360 aa	Predicted RBP	10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	CORT	O00230	105 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	DDT	P30046	118 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	BRWD1-AS2	P59051	145 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	PKIA	P61925	76 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	TMEM177	Q53S58	311 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	TEX45	Q8NA69	505 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR5AN1	Q8NGI8	311 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	ARPC1A	Q92747	370 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	SIGLEC9	Q9Y336	463 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	FRY	Q5TBA9	3013 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	KIAA1644	Q3SXP7	199 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	PRSS3P2	Q8NHM4	247 aa		10.76	□□□□□ -0.69
NRXN1-233	ENST00000630543	IGHV3-49	A0A0A0MS15	119 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	TRAV5	A0A0B4J249	113 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	PGPEP1L	A6NFU8	196 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	SMAD7	O15105	426 aa	Known RBP	10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	IL4	P05112	153 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	COL8A1	P27658	744 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	SPSB3	Q6PJ21	355 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	PQLC2	Q6ZP29	291 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	SCO2	A0A1W2PP80	73 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	SNURFL	B1AK76	121 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543		M0R2Z0	102 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	RPLP1	P05386	114 aa	Known RBP	10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	VDAC2	P45880	294 aa	Predicted RBP	10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR4A5	Q8NH83	315 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	CLEC5A	Q9NY25	188 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543		A0A1W2PPI3	338 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	PGP	A6NDG6	321 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	FBXL19-AS1	Q494R0	122 aa		10.75	□□□□□ -0.69
NRXN1-233	ENST00000630543	PF4V1	P10720	104 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR10G8	Q8NGN5	311 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	HSPB9	Q9BQS6	159 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	GATC	O43716	136 aa	Known RBP	10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	PYY	P10082	97 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	RNASE2	P10153	161 aa	Known RBP	10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	PRTN3	P24158	256 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543		Q5PR19	223 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	RITA1	Q96K30	269 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR2D3	Q8NGH3	330 aa		10.74	□□□□□ -0.69
NRXN1-233	ENST00000630543	OR51M1	Q9H341	326 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms