RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 VSIRQ9H7M9 311 aa5.92□□□□□ -1.46
PTP4A1-206ENST00000627002 TNFRSF19Q9NS68 423 aa5.92□□□□□ -1.46
PTP4A1-206ENST00000627002 ZNF355PQ9NSJ1 428 aa5.92□□□□□ -1.46
PTP4A1-206ENST00000627002 FBXL7Q9UJT9 491 aa5.92□□□□□ -1.46
PTP4A1-206ENST00000627002 VPS13CQ709C8 3753 aa5.92□□□□□ -1.46
PTP4A1-206ENST00000627002 IGKV1D-37A0A075B6S9 117 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 ELOA3CA0A087WX78 387 aaPredicted RBP5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 TRBV9A0A0B4J1U6 114 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 IGHV3-21A0A0B4J1V1 117 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 MAP1LC3B2A6NCE7 125 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 FAM223BA6NKX1 122 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 LINC01548A6NM66 108 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 G3V318 75 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 OR2J3O76001 311 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 YIF1AO95070 293 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 IGHV3-48P01763 117 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 FCGR2BP31994 310 aaPredicted RBP5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 RHOBP62745 196 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 BLCAPP62952 87 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 ZNF726P1Q15940 193 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 SPSB3Q6PJ21 355 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 IL17RELQ6ZVW7 336 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 FAM223AQ8IWN6 122 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 NECAP1Q8NC96 275 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 GATAD1Q8WUU5 269 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 RAB24Q969Q5 203 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 FAM210AQ96ND0 272 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 ATP6V0BQ99437 205 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 PFDN5Q99471 154 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 PRSS22Q9GZN4 317 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 NPFFR1Q9GZQ6 430 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 MAP1LC3BQ9GZQ8 125 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 GAR1Q9NY12 217 aaKnown RBP5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 C21orf62Q9NYP8 219 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 MRPL36Q9P0J6 103 aaKnown RBP5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 CCDC168Q8NDH2 2452 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 MED13LQ71F56 2210 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 CR1P17927 2039 aa5.91□□□□□ -1.46
PTP4A1-206ENST00000627002 PRRC2AP48634 2157 aaKnown RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 ITPR3Q14573 2671 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 HIVEP1P15822 2718 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 TRBV7-1A0A0A6YYK4 115 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 I3L521 148 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 GNG7O60262 68 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 COX7A2P2O60397 106 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 NDUFB8O95169 186 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 IFNA1P01562 189 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 OR5G3P0C626 314 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 IGLC1P0CG04 106 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 PPIFP30405 207 aaKnown RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 TAGLN2P37802 199 aaKnown RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 PPT1P50897 306 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 TAS2R45P59539 299 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 PLP1P60201 277 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 YPEL3P61236 119 aaPredicted RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 RHOGP84095 191 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 ZNF90Q03938 601 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 PMS2P11Q13670 270 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 PEA15Q15121 130 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 Q56UQ5 140 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 LCN15Q6UWW0 184 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 S100A7AQ86SG5 101 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 EEF1AKMT3Q96AZ1 226 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 USMG5Q96IX5 58 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 MRPL32Q9BYC8 188 aaKnown RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 SMDT1Q9H4I9 107 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 DNAJC4Q9NNZ3 241 aa5.9□□□□□ -1.46
PTP4A1-206ENST00000627002 TET2Q6N021 2002 aaPredicted RBP5.9□□□□□ -1.47
PTP4A1-206ENST00000627002 PDZD2O15018 2839 aa5.9□□□□□ -1.47
PTP4A1-206ENST00000627002 SETD2Q9BYW2 2564 aaPredicted RBP5.9□□□□□ -1.47
PTP4A1-206ENST00000627002 A0A1B0GV50 99 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 TMEM89A2RUT3 159 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 RBFOX3A6NFN3 312 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 NUPL2O15504 423 aaKnown RBP5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 HYPMO75409 117 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 CXorf1O96002 111 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 TOMM40O96008 361 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 STAG3L2P0CL84 134 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 STAG3L3P0CL85 134 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 RD3LP0DJH9 198 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 GATA2P23769 480 aaPredicted RBP5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 PSMB3P49720 205 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 ATP5G2Q06055 141 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 GUK1Q16774 197 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 C15orf32Q32M92 178 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 TIGITQ495A1 244 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 C10orf113Q5VZT2 155 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 SSX7Q7RTT5 188 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 EIF5A2Q9GZV4 153 aaKnown RBP5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 TREM1Q9NP99 234 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 MANBALQ9NQG1 85 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 TECRQ9NZ01 308 aaKnown RBP5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 CDC42EP3Q9UKI2 254 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 FUT9Q9Y231 359 aa5.89□□□□□ -1.47
PTP4A1-206ENST00000627002 A0A0G2JLM5 398 aa5.88□□□□□ -1.47
PTP4A1-206ENST00000627002 PSMB11A5LHX3 300 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms