RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 FBXL17Q9UF56 701 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 IGHV3-66A0A0C4DH42 116 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 CTDSPLO15194 276 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 IGKV1-17P01599 117 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
UPF3B-204ENST00000619445 OR5AC1P0C628 307 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 ATP5IP56385 69 aaPredicted RBP8.71□□□□□ -1.02
UPF3B-204ENST00000619445 SNRPD3P62318 126 aaKnown RBP8.71□□□□□ -1.02
UPF3B-204ENST00000619445 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
UPF3B-204ENST00000619445 LILRB2Q8N423 598 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 SLC24A4Q8NFF2 622 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 OR4D10Q8NGI6 311 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 CACNG5Q9UF02 275 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 AGRNO00468 2067 aa8.71□□□□□ -1.02
UPF3B-204ENST00000619445 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 CEBPZOSA8MTT3 80 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 OR10J1P30954 320 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 NANOS2P60321 138 aaKnown RBP8.7□□□□□ -1.02
UPF3B-204ENST00000619445 TMEM268Q5VZI3 342 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 PRSS54Q6PEW0 395 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 GPR141Q7Z602 305 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 DCANP1Q8TF63 244 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 BCL7BQ9BQE9 202 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
UPF3B-204ENST00000619445 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 TMEM56-RWDD3S4R434 201 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 U3KQ87 197 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 U3KQE9 123 aa8.7□□□□□ -1.02
UPF3B-204ENST00000619445 A0A0G2JRQ6 117 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 ZNF705EA8MWA4 302 aaPredicted RBP8.69□□□□□ -1.02
UPF3B-204ENST00000619445 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 NPY1RP25929 384 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 RND2P52198 227 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 SRPXP78539 464 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 DHRS2Q13268 280 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 TIGITQ495A1 244 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 Q6ZRM9 215 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 SELENOHQ8IZQ5 122 aaKnown RBP8.69□□□□□ -1.02
UPF3B-204ENST00000619445 Q8NAQ8 132 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 RTBDNQ9BSG5 229 aaPredicted RBP8.69□□□□□ -1.02
UPF3B-204ENST00000619445 NAA50Q9GZZ1 169 aaKnown RBP8.69□□□□□ -1.02
UPF3B-204ENST00000619445 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
UPF3B-204ENST00000619445 GPR132Q9UNW8 380 aa8.69□□□□□ -1.02
UPF3B-204ENST00000619445 FABP1P07148 127 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 RD3LP0DJH9 198 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 ANXA3P12429 323 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 IL18Q14116 193 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 C16orf54Q6UWD8 224 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 FAM24BQ8N5W8 94 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 RAB2BQ8WUD1 216 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 GLMPQ8WWB7 406 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 DIRAS2Q96HU8 199 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 MIXL1Q9H2W2 232 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 MRPL36Q9P0J6 103 aaKnown RBP8.68□□□□□ -1.02
UPF3B-204ENST00000619445 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
UPF3B-204ENST00000619445 A0A0B4J2A0 478 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 TOMM40O96008 361 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 IFNA10P01566 189 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 IL4P05112 153 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 SMIM18P0DKX4 95 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 CCR6P51684 374 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 MLANAQ16655 118 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 NMSQ5H8A3 153 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 ACTL10Q5JWF8 245 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 SAMD13Q5VXD3 122 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
UPF3B-204ENST00000619445 OR4C16Q8NGL9 310 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 LHFPL5Q8TAF8 219 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 GPR146Q96CH1 333 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
UPF3B-204ENST00000619445 SHPKQ9UHJ6 478 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
UPF3B-204ENST00000619445 TRAV10A0A0B4J240 114 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 CTDSP2O14595 271 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
UPF3B-204ENST00000619445 SMCO1Q147U7 214 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 PSMG4Q5JS54 123 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 OR8G2PQ6IF36 304 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 RPP25LQ8N5L8 163 aaKnown RBP8.66□□□□□ -1.02
UPF3B-204ENST00000619445 OR51S1Q8NGJ8 323 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 OR51G1Q8NGK1 321 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 NPIPB3Q92617 1050 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
UPF3B-204ENST00000619445 DUXBA0A1W2PPF3 345 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 ANKRD20A5PA0PJZ0 165 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 IGLL5B9A064 214 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 FAM90A26D6RGX4 464 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 DEFB4AO15263 64 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 BUB3O43684 328 aa8.65□□□□□ -1.02
UPF3B-204ENST00000619445 NOL3O60936 208 aaKnown RBP8.65□□□□□ -1.02
UPF3B-204ENST00000619445 GIG44P09565 113 aaPredicted RBP8.65□□□□□ -1.02
UPF3B-204ENST00000619445 GPX4P36969 197 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms