RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PNKDQ8N490 385 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 SMIM12Q96EX1 92 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 MRPL18Q9H0U6 180 aaKnown RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 KIF26AQ9ULI4 1882 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 ITGB1BP1O14713 200 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 WNT2P09544 360 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 UCNP55089 124 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRB3Q04118 309 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNASEKQ6P5S7 137 aaKnown RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 SLC25A48Q6ZT89 311 aaKnown RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PPP1R27Q86WC6 154 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM170AQ8WVE7 144 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNRD1Q9P1U0 126 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 SZT2Q5T011 3432 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PYYP10082 97 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 APOBEC3AP31941 199 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 CEACAM8P31997 349 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 GATA4P43694 442 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR5I1Q13606 314 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNF151Q2KHN1 245 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 DUX4L9Q6RFH8 374 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGFL3Q6UXB1 125 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PIP4P1Q86T03 277 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 GPR82Q96P67 336 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 BOD1L1Q8NFC6 3051 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF207O43670 478 aaKnown RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 COMPP49747 757 aaPredicted RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PAFAH1B2P68402 229 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 FOXL1Q12952 345 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM183BQ1AE95 376 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 C5orf17Q8NAS9 161 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR8B3Q8NGG8 313 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM167AQ8TBQ9 72 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR8B2Q96RD0 313 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 ELOVL5Q9NYP7 299 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRRC2AP48634 2157 aaKnown RBP4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM256Q8N2U0 113 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 OR1L6Q8NGR2 347 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 FAM122AQ96E09 287 aa4.62□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF137PP52743 207 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TAS2R60P59551 318 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 C2orf83Q53S99 150 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 SSX7Q7RTT5 188 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TCF23Q7RTU1 214 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 CENPVQ7Z7K6 275 aaPredicted RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM133Q9H2Q1 129 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 C11orf1Q9H5F2 150 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 BET1LQ9NYM9 111 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMSB15BA0A087X1C1 80 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 LIPFP07098 398 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM11P17152 192 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 S100A7P31151 101 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 IGFL2Q6UWQ7 119 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 MGST2Q99735 147 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNASE7Q9H1E1 156 aaKnown RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 CLEC3BP05452 202 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 NPPCP23582 126 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 ZNF295-AS1Q8N0V1 137 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 PYGO2Q9BRQ0 406 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 CBLN4Q9NTU7 201 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNF24Q9Y225 148 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 SERF1AO75920 110 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 LOXL3P58215 753 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 Q56UQ5 140 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 PRSS3P2Q8NHM4 247 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 MRPL32Q9BYC8 188 aaKnown RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 PARD6GQ9BYG4 376 aaPredicted RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 IL36BQ9NZH7 164 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 REV3LO60673 3130 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 MUC22E2RYF6 1773 aaPredicted RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 BRWD1-AS2P59051 145 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 POU2AF1Q16633 256 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 SAPCD1Q5SSQ6 148 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 ITPR3Q14573 2671 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNASEH2CQ8TDP1 164 aaKnown RBP4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 VKORC1Q9BQB6 163 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 NDUFAF3Q9BU61 184 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 NCOR1P1Q9H4R4 102 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 LPAR2Q9HBW0 351 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 OSTCQ9NRP0 149 aa4.61□□□□□ -1.67
SYNCRIP-204ENST00000616122 EML6Q6ZMW3 1958 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 IL4P05112 153 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 RNASE2P10153 161 aaKnown RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 AREGP15514 252 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 GOLT1AQ6ZVE7 132 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 LINC00305Q7Z4B0 112 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 SPACA3Q8IXA5 215 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 NDFIP1Q9BT67 221 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 TRAV5A0A0B4J249 113 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 TEX50A0A1B0GTY4 177 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 SRRM4A7MD48 611 aaKnown RBP4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 ISLRO14498 428 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 TYMSP04818 313 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 CD24P25063 80 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 SCGB2A2Q13296 93 aa4.6□□□□□ -1.67
SYNCRIP-204ENST00000616122 SEM1Q6ZVN7 128 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms