RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 M0R1B8 84 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 IGKV3-15P01624 115 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 TAS2R45P59539 299 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 TRAT1Q6PIZ9 186 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 OBP2BQ9NPH6 170 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 SERTAD4Q9NUC0 356 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 PEF1Q9UBV8 284 aaKnown RBP17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 C3orf80F5H4A9 247 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 NUDT3O95989 172 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 CECR9P0C854 216 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 MIR17HGQ75NE6 70 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 TCF24Q7RTU0 167 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 MS4A6AQ9H2W1 248 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 DOPEY1Q5JWR5 2465 aa17.85■□□□□ 0.45
POLR2J3-220ENST00000613744 RNASEKQ6P5S7 137 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 CHCHD1Q96BP2 118 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 IGHV1-18A0A0C4DH31 117 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 OR2T8A6NH00 312 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 ADH4P08319 380 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 SSTR5P35346 364 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 KIR2DS2P43631 304 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 AMMECR1LQ6DCA0 310 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 TMEM191AQ9H0A3 160 aa17.84■□□□□ 0.45
POLR2J3-220ENST00000613744 GAGE12BA1L429 117 aa17.83■□□□□ 0.45
POLR2J3-220ENST00000613744 MGST1P10620 155 aaKnown RBP17.83■□□□□ 0.45
POLR2J3-220ENST00000613744 HIST1H1AQ02539 215 aaPredicted RBP17.83■□□□□ 0.45
POLR2J3-220ENST00000613744 SLC25A40Q8TBP6 338 aa17.83■□□□□ 0.45
POLR2J3-220ENST00000613744 TCF19Q9Y242 345 aa17.83■□□□□ 0.45
POLR2J3-220ENST00000613744 HELZ2Q9BYK8 2649 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 SPTAN1Q13813 2472 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 PSPNO60542 156 aa17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 ABHD12Q8N2K0 398 aa17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 PMCHL2Q9BQD1 86 aa17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 PLEKHA3Q9HB20 300 aa17.83■□□□□ 0.44
POLR2J3-220ENST00000613744 LRRK2Q5S007 2527 aa17.82■□□□□ 0.44
POLR2J3-220ENST00000613744 MFAP2P55001 183 aa17.82■□□□□ 0.44
POLR2J3-220ENST00000613744 GGTLC3B5MD39 225 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 SYS1-DBNDD2H3BUS1 97 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 IGLV1-44P01699 117 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 TMEM11P17152 192 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 PSG9Q00887 426 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 FAM120AOSQ5T036 256 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 NABP2Q9BQ15 211 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 PSG11Q9UQ72 335 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 CORTO00230 105 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 FCGR3BO75015 233 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 OR5AL1P0C617 328 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 NBEAP1P0C6P0 100 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 SPATA12Q7Z6I5 190 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 SCRT2Q9NQ03 307 aa17.81■□□□□ 0.44
POLR2J3-220ENST00000613744 USF3Q68DE3 2245 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 MUC21A0A0G2JKD1 596 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 MUC21A0A140T8X8 626 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 SMPD2O60906 423 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 GPR12P47775 334 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 MUC21Q5SSG8 566 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 COQ2Q96H96 371 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 HEATR1Q9H583 2144 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 CADP27708 2225 aa17.8■□□□□ 0.44
POLR2J3-220ENST00000613744 IGLC1P0CG04 106 aa17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 NUP35Q8NFH5 326 aa17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 ZNF503Q96F45 646 aa17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 GCN1Q92616 2671 aaKnown RBP17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 IGFBP2P18065 325 aa17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 GDF5OSQ5U4N7 250 aa17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 MRPL32Q9BYC8 188 aaKnown RBP17.79■□□□□ 0.44
POLR2J3-220ENST00000613744 ANKHD1Q8IWZ3 2542 aaKnown RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 SPINT2O43291 252 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 RPL8P62917 257 aaKnown RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 BSPH1Q075Z2 132 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 AESQ08117 197 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 FAM53AQ6NSI3 398 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 NHLRC2Q8NBF2 726 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 PLPPR2Q96GM1 343 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 SOX21Q9Y651 276 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 A0A1B0GXF2 115 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 C15orf61A6NNL5 157 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 CD40P25942 277 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 APOBEC3AP31941 199 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 ATP5IP56385 69 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 SEC11AP67812 179 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 FAM169BQ8N8A8 192 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 Q8TCH9 128 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 ENY2Q9NPA8 101 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 TMEM140Q9NV12 185 aa17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 FOXA2Q9Y261 457 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-220ENST00000613744 OR2T6Q8NHC8 308 aa17.77■□□□□ 0.44
POLR2J3-220ENST00000613744 MEGF9Q9H1U4 602 aa17.77■□□□□ 0.44
POLR2J3-220ENST00000613744 GCM1Q9NP62 436 aa17.77■□□□□ 0.44
POLR2J3-220ENST00000613744 DUSP13Q9UII6 198 aa17.77■□□□□ 0.44
POLR2J3-220ENST00000613744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 ACTL6BO94805 426 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 C8orf88P0DMB2 117 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 HIST1H1EP10412 219 aaKnown RBP17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 TMEM108Q6UXF1 575 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 KIR3DL3Q8N743 410 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 URB1-AS1Q96HZ7 61 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 FZR1Q9UM11 496 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 OR7C2O60412 319 aa17.76■□□□□ 0.43
POLR2J3-220ENST00000613744 COL8A1P27658 744 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms