RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 SCRT1Q9BWW7 348 aa12.83□□□□□ -0.36
TNXB-209ENST00000613214 TRAV13-1A0A0B4J241 112 aa12.83□□□□□ -0.36
TNXB-209ENST00000613214 SUMO4Q6EEV6 95 aa12.83□□□□□ -0.36
TNXB-209ENST00000613214 A0A087WWL8 130 aa12.83□□□□□ -0.36
TNXB-209ENST00000613214 FOXG1P55316 489 aaPredicted RBP12.83□□□□□ -0.36
TNXB-209ENST00000613214 MORN2Q502X0 79 aa12.83□□□□□ -0.36
TNXB-209ENST00000613214 GREM1O60565 184 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 IGHV1-46P01743 117 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 Q8TAT8 98 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 IQCF6A8MYZ5 107 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 RPL32P62910 135 aaKnown RBP12.82□□□□□ -0.36
TNXB-209ENST00000613214 ZNF876PQ49A33 203 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 LHBP01229 141 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 DIDO1Q9BTC0 2240 aaKnown RBP12.82□□□□□ -0.36
TNXB-209ENST00000613214 C1orf159Q96HA4 380 aa12.82□□□□□ -0.36
TNXB-209ENST00000613214 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 UPK2O00526 184 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 CFHR1Q03591 330 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 Q0VFX4 171 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 UNQ6494/PRO21346Q6UXR6 183 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 LYZL4Q96KX0 146 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 RTBDNQ9BSG5 229 aaPredicted RBP12.81□□□□□ -0.36
TNXB-209ENST00000613214 OTORQ9NRC9 128 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 PEF1Q9UBV8 284 aaKnown RBP12.81□□□□□ -0.36
TNXB-209ENST00000613214 PMS2P5A8MQ11 134 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 TCRAP04437 139 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 KNCNA6PVL3 124 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 LINC00205P59089 165 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
TNXB-209ENST00000613214 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
TNXB-209ENST00000613214 FANCMQ8IYD8 2048 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
TNXB-209ENST00000613214 TOMM40O96008 361 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNXB-209ENST00000613214 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 IZUMO1RA6ND01 250 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 SRRM4A7MD48 611 aaKnown RBP12.8□□□□□ -0.36
TNXB-209ENST00000613214 PRTN3P24158 256 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 CTHRC1Q96CG8 243 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 PRR30Q53SZ7 412 aaPredicted RBP12.8□□□□□ -0.36
TNXB-209ENST00000613214 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
TNXB-209ENST00000613214 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 IGHV2-26A0A0B4J1V2 119 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 Q96MF0 132 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 CACNA1IQ9P0X4 2223 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 F5H768 121 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 HOXA3O43365 443 aaPredicted RBP12.79□□□□□ -0.36
TNXB-209ENST00000613214 TRGV11A0A075B6L2 103 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 M0R2P5 195 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 SERF1AO75920 110 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 CLPSL2Q6UWE3 100 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 MCRIP2Q9BUT9 160 aaKnown RBP12.79□□□□□ -0.36
TNXB-209ENST00000613214 F8VVB4 439 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 F8VWA3 439 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 ERCC8Q13216 396 aa12.79□□□□□ -0.36
TNXB-209ENST00000613214 SP5Q6BEB4 398 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 MPDZO75970 2070 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 MBD3L4A6NDZ8 208 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 MBD3L3A6NE82 208 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 MBD3L5A6NJ08 208 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 SMKR1H3BMG3 65 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 MBD3L2Q8NHZ7 208 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 CYSLTR1Q9Y271 337 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 MSRB2Q9Y3D2 182 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 COL4A5P29400 1685 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 A0A0G2JNJ9 132 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 SYNJ2BPP57105 145 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 Q9UFV3 132 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 PTPRFP10586 1907 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 CA7P43166 264 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
TNXB-209ENST00000613214 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 CLDN16Q9Y5I7 305 aa12.78□□□□□ -0.36
TNXB-209ENST00000613214 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.36
TNXB-209ENST00000613214 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.36
TNXB-209ENST00000613214 SSBP2P81877 361 aaPredicted RBP12.77□□□□□ -0.36
TNXB-209ENST00000613214 ZNRD1Q9P1U0 126 aa12.77□□□□□ -0.37
TNXB-209ENST00000613214 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.37
TNXB-209ENST00000613214 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
TNXB-209ENST00000613214 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
TNXB-209ENST00000613214 AKAP6Q13023 2319 aa12.77□□□□□ -0.37
TNXB-209ENST00000613214 C15orf61A6NNL5 157 aa12.77□□□□□ -0.37
TNXB-209ENST00000613214 WISP3O95389 354 aaPredicted RBP12.77□□□□□ -0.37
TNXB-209ENST00000613214 F8WEM9 126 aa12.76□□□□□ -0.37
TNXB-209ENST00000613214 COL8A2P25067 703 aa12.76□□□□□ -0.37
TNXB-209ENST00000613214 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
TNXB-209ENST00000613214 WBP1Q96G27 269 aa12.76□□□□□ -0.37
TNXB-209ENST00000613214 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms