RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 C18orf32Q8TCD1 76 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 ST20Q9HBF5 79 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
RTN1-209ENST00000611068 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 K7EP34 96 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 PGLYRP1O75594 196 aaPredicted RBP13.03□□□□□ -0.32
RTN1-209ENST00000611068 PRDX2P32119 198 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 RPL24P83731 157 aaKnown RBP13.03□□□□□ -0.32
RTN1-209ENST00000611068 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 MRPL54Q6P161 138 aaKnown RBP13.03□□□□□ -0.32
RTN1-209ENST00000611068 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 GCM1Q9NP62 436 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.03□□□□□ -0.32
RTN1-209ENST00000611068 H0Y980 276 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 H3BUT2 72 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 HSBP1O75506 76 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 IGHV3-43DP0DP04 118 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 LINC00596Q86U02 117 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 FGFRL1Q8N441 504 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 PERPQ96FX8 193 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 V9GYV3 84 aa13.03□□□□□ -0.32
RTN1-209ENST00000611068 DEFB108AA8MXU0 73 aa13.02□□□□□ -0.32
RTN1-209ENST00000611068 IGKV1-39P01597 117 aa13.02□□□□□ -0.32
RTN1-209ENST00000611068 IGKV1D-39P04432 117 aa13.02□□□□□ -0.32
RTN1-209ENST00000611068 HSD52Q0P140 79 aa13.02□□□□□ -0.32
RTN1-209ENST00000611068 COQ2Q96H96 371 aa13.02□□□□□ -0.32
RTN1-209ENST00000611068 SNAI2O43623 268 aa13.02□□□□□ -0.33
RTN1-209ENST00000611068 COL8A2P25067 703 aa13.02□□□□□ -0.33
RTN1-209ENST00000611068 AKAP6Q13023 2319 aa13.02□□□□□ -0.33
RTN1-209ENST00000611068 E7EQL1 145 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 TECRQ9NZ01 308 aaKnown RBP13.01□□□□□ -0.33
RTN1-209ENST00000611068 TSSC4Q9Y5U2 329 aaPredicted RBP13.01□□□□□ -0.33
RTN1-209ENST00000611068 KIR2DS1A0A191URI9 304 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 SH2D7A6NKC9 451 aaPredicted RBP13.01□□□□□ -0.33
RTN1-209ENST00000611068 SHISA9B4DS77 424 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 MT-ND6P03923 174 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 F2RP25116 425 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 EDDM3BP56851 147 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 KIR2DS1Q14954 304 aa13.01□□□□□ -0.33
RTN1-209ENST00000611068 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
RTN1-209ENST00000611068 USP24Q9UPU5 2620 aa13□□□□□ -0.33
RTN1-209ENST00000611068 GNLYP22749 145 aa13□□□□□ -0.33
RTN1-209ENST00000611068 CX3CL1P78423 397 aa13□□□□□ -0.33
RTN1-209ENST00000611068 C3orf36Q3SXR2 165 aa13□□□□□ -0.33
RTN1-209ENST00000611068 LINC00173Q6ZV60 143 aa13□□□□□ -0.33
RTN1-209ENST00000611068 DSCAMO60469 2012 aa13□□□□□ -0.33
RTN1-209ENST00000611068 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
RTN1-209ENST00000611068 SRRM5B3KS81 715 aa13□□□□□ -0.33
RTN1-209ENST00000611068 ZG16O60844 167 aa13□□□□□ -0.33
RTN1-209ENST00000611068 FXYD3Q14802 87 aa13□□□□□ -0.33
RTN1-209ENST00000611068 NUP37Q8NFH4 326 aa13□□□□□ -0.33
RTN1-209ENST00000611068 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
RTN1-209ENST00000611068 CCL17Q92583 94 aa13□□□□□ -0.33
RTN1-209ENST00000611068 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
RTN1-209ENST00000611068 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
RTN1-209ENST00000611068 DYSFO75923 2080 aa13□□□□□ -0.33
RTN1-209ENST00000611068 CLDN1O95832 211 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 CRYBB3P26998 211 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
RTN1-209ENST00000611068 OR2K2Q8NGT1 345 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 CCL13Q99616 98 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 SCRT2Q9NQ03 307 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 C12orf77C9JDV5 145 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 OR10J4P0C629 311 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
RTN1-209ENST00000611068 CD1BP29016 333 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 GPR183P32249 361 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 PRR31Q5SQ13 230 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 TMEM70Q9BUB7 260 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 FLNCQ14315 2725 aa12.99□□□□□ -0.33
RTN1-209ENST00000611068 LYNX1G3V0Z9 82 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 F2RL2O00254 374 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 APCSP02743 223 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 LYNX1P0DP58 116 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
RTN1-209ENST00000611068 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 AP1S3Q96PC3 154 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
RTN1-209ENST00000611068 CHODLQ9H9P2 273 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 K7EQM0 130 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 LINC00205P59089 165 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 MZT1Q08AG7 82 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 TMEM14EPQ6UXP3 125 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 DYNLRB1Q9NP97 96 aa12.98□□□□□ -0.33
RTN1-209ENST00000611068 C17orf100A8MU93 164 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 CD3EP07766 207 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 RPL31P62899 125 aaKnown RBP12.97□□□□□ -0.33
RTN1-209ENST00000611068 UTF1Q5T230 341 aa12.97□□□□□ -0.33
RTN1-209ENST00000611068 C2orf91Q6ZV80 131 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms