RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PBOV1Q9GZY1 135 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CA10Q9NS85 328 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 FKBP11Q9NYL4 201 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ZNF443Q9Y2A4 671 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MED31Q9Y3C7 131 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CLTCL1P53675 1640 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ABCA6Q8N139 1617 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 URB2Q14146 1524 aaKnown RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 RGS12O14924 1447 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PRG4Q92954 1404 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PARP14Q460N5 1801 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CC2D2AQ9P2K1 1620 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 ADAMTSL1Q8N6G6 1762 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CUX1P39880 1505 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 ARHGEF12Q9NZN5 1544 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 TMED7-TICAM2A0A0A6YYA0 188 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 TEX50A0A1B0GTY4 177 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CD300LBA8K4G0 201 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 HMSDA8MTL9 139 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CCDC179H3BU77 68 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 SIX6O95475 246 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 ADCYAP1P18509 176 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CXCL3P19876 107 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 TSPOP30536 169 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 SLC38A11Q08AI6 406 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CATR1Q13166 79 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 KLRD1Q13241 179 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 AMMECR1LQ6DCA0 310 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 OR2T2Q6IF00 324 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 Q6Q795 121 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 HRCT1Q6UXD1 115 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 SLC25A26Q70HW3 274 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 SH2D6Q7Z4S9 175 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 ORMDL3Q8N138 153 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 EXOC3-AS1Q8N2X6 119 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 OR4B1Q8NGF8 309 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 OR10D3Q8NH80 312 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 STARD4Q96DR4 205 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 PEBP4Q96S96 227 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 NAA38Q9BRA0 125 aaKnown RBP3.16□□□□□ -1.9
LINC00397-202ENST00000606785 TCEAL2Q9H3H9 227 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-202ENST00000606785 PARP11Q9NR21 331 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-202ENST00000606785 INSIG2Q9Y5U4 225 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 LOXHD1Q8IVV2 1947 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 NUP210LQ5VU65 1888 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 CFTRP13569 1480 aa3.16□□□□□ -1.9
LINC00397-202ENST00000606785 COL16A1Q07092 1604 aaPredicted RBP3.15□□□□□ -1.9
LINC00397-202ENST00000606785 TOPBP1Q92547 1522 aa3.15□□□□□ -1.9
LINC00397-202ENST00000606785 IGHV1-3A0A0C4DH29 117 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 LOC107984640A0A0U1RRK4 108 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 IGLC7A0M8Q6 106 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 MYBPHLA2RUH7 354 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 GGT3PA6NGU5 568 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 RIIAD1A6NNX1 92 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 GGTLC3B5MD39 225 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF670-ZNF695F2Z2N8 137 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 OVOL1O14753 267 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 RER1O15258 196 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 SLC37A4O43826 429 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 DPM2O94777 84 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CXorf1O96002 111 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 TNFP01375 233 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 IGKV5-2P06315 115 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CXCL2P19875 107 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 NFYAP23511 347 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 PSMB9P28065 219 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF93P35789 620 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF83P51522 516 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 RBM11P57052 281 aaKnown RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 LINC00303Q3SY05 128 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 TDRG1Q3Y452 100 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 Q499Y3 187 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CLLU1OSQ5K130 101 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 FAM201AQ5SY85 155 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 MRPL54Q6P161 138 aaKnown RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 TIFABQ6ZNK6 161 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 ZNF550Q7Z398 422 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 PRNTQ86SH4 94 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 OR5D16Q8NGK9 328 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CT55Q8WUE5 264 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 FRZBQ92765 325 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 YPEL4Q96NS1 127 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 SPIN2AQ99865 258 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 SPIN2BQ9BPZ2 258 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 TMEM191AQ9H0A3 160 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 NPVFQ9HCQ7 196 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 CCDC167Q9P0B6 97 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 LAMTOR3Q9UHA4 124 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 TPRKBQ9Y3C4 175 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 DOCK3Q8IZD9 2030 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 PIK3C2BO00750 1634 aa3.15□□□□□ -1.91
LINC00397-202ENST00000606785 RNF17Q9BXT8 1623 aaKnown RBP3.15□□□□□ -1.91
LINC00397-202ENST00000606785 QRICH2Q9H0J4 1663 aa3.14□□□□□ -1.91
LINC00397-202ENST00000606785 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms