RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 B2MP61769 119 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 SELENOTP62341 195 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 MIC13Q5XKP0 118 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 ZNF329Q86UD4 541 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 STPG3Q8N7X2 389 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 USMG5Q96IX5 58 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 SERTAD4Q9NUC0 356 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 GAR1Q9NY12 217 aaKnown RBP17.6■□□□□ 0.41
IRF3-228ENST00000601291 PLA2G2EQ9NZK7 142 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 SLC45A2Q9UMX9 530 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 TRBV7-1A0A0A6YYK4 115 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 ZNF705EA8MWA4 302 aaPredicted RBP17.59■□□□□ 0.41
IRF3-228ENST00000601291 FABP1P07148 127 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 IGLC1P0CG04 106 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 TMEM41BQ5BJD5 291 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 TEX38Q6PEX7 206 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 DPPA3Q6W0C5 159 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 ZNF502Q8TBZ5 544 aa17.59■□□□□ 0.41
IRF3-228ENST00000601291 IGHV3-23P01764 117 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 PRR20EP86478 221 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 PRR20CP86479 221 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 PRR20DP86480 221 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 PRR20BP86481 221 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 PRR20AP86496 221 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 ACOT6Q3I5F7 207 aaPredicted RBP17.58■□□□□ 0.41
IRF3-228ENST00000601291 BPIFCQ8NFQ6 507 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 SLC39A9Q9NUM3 307 aa17.58■□□□□ 0.41
IRF3-228ENST00000601291 SETXQ7Z333 2677 aaKnown RBP17.58■□□□□ 0.4
IRF3-228ENST00000601291 A0A0G2JLM5 398 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 PSMB8P28062 276 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 RAB9AP51151 201 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 ZNF90Q03938 601 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 CLLU1Q5K131 121 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 Q6ZRG5 221 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 ATP6V0BQ99437 205 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 ELANEP08246 267 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 NMBP08949 121 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 M6PRP20645 277 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 BLOC1S1P78537 153 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 FOXE3Q13461 319 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 FAM213BQ8TBF2 198 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 PCNPQ8WW12 178 aaKnown RBP17.57■□□□□ 0.4
IRF3-228ENST00000601291 SAT2Q96F10 170 aaPredicted RBP17.57■□□□□ 0.4
IRF3-228ENST00000601291 KLK15Q9H2R5 256 aa17.57■□□□□ 0.4
IRF3-228ENST00000601291 F8W735 103 aaPredicted RBP17.56■□□□□ 0.4
IRF3-228ENST00000601291 TIGITQ495A1 244 aa17.56■□□□□ 0.4
IRF3-228ENST00000601291 COMMD1Q8N668 190 aa17.56■□□□□ 0.4
IRF3-228ENST00000601291 C16orf95Q9H693 158 aa17.56■□□□□ 0.4
IRF3-228ENST00000601291 VSIRQ9H7M9 311 aa17.56■□□□□ 0.4
IRF3-228ENST00000601291 OR2T8A6NH00 312 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 LINC00869P0C866 280 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 GATA2P23769 480 aaPredicted RBP17.55■□□□□ 0.4
IRF3-228ENST00000601291 RAB2AP61019 212 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 ZNF616Q08AN1 781 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 OR10G4Q8NGN3 311 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 OR10G9Q8NGN4 311 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 OR10G7Q8NGN6 311 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 CCDC140Q96MF4 163 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 RPRMQ9NS64 109 aa17.55■□□□□ 0.4
IRF3-228ENST00000601291 NUPL2O15504 423 aaKnown RBP17.54■□□□□ 0.4
IRF3-228ENST00000601291 IGKV1-17P01599 117 aa17.54■□□□□ 0.4
IRF3-228ENST00000601291 GPR183P32249 361 aa17.54■□□□□ 0.4
IRF3-228ENST00000601291 YIF1AO95070 293 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 FHITP49789 147 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 YPEL3P61236 119 aaPredicted RBP17.53■□□□□ 0.4
IRF3-228ENST00000601291 C10orf99Q6UWK7 81 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 CLEC19AQ6UXS0 136 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 NDUFA7O95182 113 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 TOMM40O96008 361 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 CLEC3BP05452 202 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 RD3LP0DJH9 198 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 LCNL1Q6ZST4 164 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 KLHDC1Q8N7A1 406 aa17.53■□□□□ 0.4
IRF3-228ENST00000601291 MTORP42345 2549 aa17.52■□□□□ 0.4
IRF3-228ENST00000601291 CTSGP08311 255 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 PSG1P11464 419 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 FAM209BQ5JX69 171 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 PXDC1Q5TGL8 231 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 SPSB3Q6PJ21 355 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 C19orf24Q9BVV8 132 aa17.52■□□□□ 0.39
IRF3-228ENST00000601291 ACTR3CQ9C0K3 210 aaPredicted RBP17.52■□□□□ 0.39
IRF3-228ENST00000601291 TGOLN2O43493 480 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 GCSAMLQ5JQS6 135 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 FAM122CQ6P4D5 195 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 RPP25LQ8N5L8 163 aaKnown RBP17.51■□□□□ 0.39
IRF3-228ENST00000601291 RNF152Q8N8N0 203 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 OR1L4Q8NGR5 311 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 Q8WTZ3 238 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 PFDN5Q99471 154 aa17.51■□□□□ 0.39
IRF3-228ENST00000601291 A0A1W2PPV4 95 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 COX7A2P2O60397 106 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 IGHV3-11P01762 117 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 H2AFB1P0C5Y9 115 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 CDC34P49427 236 aaPredicted RBP17.5■□□□□ 0.39
IRF3-228ENST00000601291 OR4X2Q8NGF9 303 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 OR51G1Q8NGK1 321 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 RCC1LQ96I51 464 aaKnown RBP17.5■□□□□ 0.39
IRF3-228ENST00000601291 GNB4Q9HAV0 340 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 F8P00451 2351 aa17.5■□□□□ 0.39
IRF3-228ENST00000601291 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms