RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 BTNL8Q6UX41 500 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 STOML3Q8TAV4 291 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 LSM10Q969L4 123 aaKnown RBP10.35□□□□□ -0.75
SCAF1-203ENST00000598359 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 OR5AC2Q9NZP5 309 aa10.35□□□□□ -0.75
SCAF1-203ENST00000598359 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
SCAF1-203ENST00000598359 LYSTQ99698 3801 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 IGHV3OR16-8A0A075B7F1 116 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 C15orf61A6NNL5 157 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 A8MWP6 167 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 DEDDO75618 318 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 SCAF4O95104 1147 aaKnown RBP10.34□□□□□ -0.75
SCAF1-203ENST00000598359 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
SCAF1-203ENST00000598359 OR4D5Q8NGN0 318 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 RRNAD1Q96FB5 475 aaKnown RBP10.34□□□□□ -0.75
SCAF1-203ENST00000598359 CHRDL1Q9BU40 450 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 TMEM14BQ9NUH8 114 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
SCAF1-203ENST00000598359 THYN1Q9P016 225 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
SCAF1-203ENST00000598359 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 TGOLN2O43493 480 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 SLC25A6P12236 298 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 RAB14P61106 215 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 SPINK9Q5DT21 86 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 NMSQ5H8A3 153 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 TMEM268Q5VZI3 342 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 THOC7Q6I9Y2 204 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 H2BFWTQ7Z2G1 175 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 UBAC2Q8NBM4 344 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 VN1R17PQ8TDU5 208 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
SCAF1-203ENST00000598359 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
SCAF1-203ENST00000598359 F8W735 103 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 K7EIM0 57 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 K7EPK0 472 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 TAAR5O14804 337 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 CYB5BO43169 146 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 IGHV3-48P01763 117 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 MBPP02686 304 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 RLN2P04090 185 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 NMBP08949 121 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 LINC00322Q6ZN03 302 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 HSD17B13Q7Z5P4 300 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 FAM212BQ9NTI7 297 aaPredicted RBP10.32□□□□□ -0.76
SCAF1-203ENST00000598359 C21orf62Q9NYP8 219 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
SCAF1-203ENST00000598359 CSMD3Q7Z407 3707 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 E5RGE8 158 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 ADMP35318 185 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 S100A10P60903 97 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 Q56UQ5 140 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 ALKAL2Q6UX46 152 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 ZNF471Q9BX82 626 aaPredicted RBP10.31□□□□□ -0.76
SCAF1-203ENST00000598359 SLC25A32Q9H2D1 315 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 EDA2RQ9HAV5 297 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
SCAF1-203ENST00000598359 STARD9Q9P2P6 4700 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 TPT1P13693 172 aaKnown RBP10.3□□□□□ -0.76
SCAF1-203ENST00000598359 P2RY1P47900 373 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 OR2C3Q8N628 320 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 BSCL2Q96G97 398 aaPredicted RBP10.3□□□□□ -0.76
SCAF1-203ENST00000598359 ZNF414Q96IQ9 312 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 C20orf24Q9BUV8 137 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 UFC1Q9Y3C8 167 aa10.3□□□□□ -0.76
SCAF1-203ENST00000598359 PITX3O75364 302 aa10.29□□□□□ -0.76
SCAF1-203ENST00000598359 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 HSPE1P61604 102 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
SCAF1-203ENST00000598359 PRCDQ00LT1 54 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms