RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF90Q03938 601 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 GUK1Q16774 197 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 PBDC1Q9BVG4 233 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 YAE1D1Q9NRH1 226 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 FBXL7Q9UJT9 491 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 TEX15Q9BXT5 2789 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 ANK3Q12955 4377 aaKnown RBP8.93□□□□□ -0.98
SMAD4-205ENST00000588745 TRBV9A0A0B4J1U6 114 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 KRBOX1C9JBD0 128 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 AP4M1O00189 453 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
SMAD4-205ENST00000588745 CD5P06127 495 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 HNF1AP20823 631 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 ZP3P21754 424 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 FCGR2BP31994 310 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-205ENST00000588745 NPBWR1P48145 328 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 MFAP4P55083 255 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 DEFA5Q01523 94 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 VN1R17PQ8TDU5 208 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 C19orf24Q9BVV8 132 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 SCRT1Q9BWW7 348 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 TMEM231Q9H6L2 316 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 TREM1Q9NP99 234 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 C21orf62Q9NYP8 219 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 FUT9Q9Y231 359 aa8.93□□□□□ -0.98
SMAD4-205ENST00000588745 PSMB11A5LHX3 300 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 GNG7O60262 68 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 OR5G3P0C626 314 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 STAG3L2P0CL84 134 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 STAG3L3P0CL85 134 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 RHOGP84095 191 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 TIGITQ495A1 244 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 FAM78BQ5VT40 261 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 SPATA31B1PQ5VZV4 182 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 Q6ZS46 218 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 SIGLECL1Q8N7X8 197 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 OR1L4Q8NGR5 311 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 GATAD1Q8WUU5 269 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 NARS2Q96I59 477 aaKnown RBP8.92□□□□□ -0.98
SMAD4-205ENST00000588745 LINC00052Q96N35 136 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 PFDN5Q99471 154 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 RNF2Q99496 336 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 EIF5A2Q9GZV4 153 aaKnown RBP8.92□□□□□ -0.98
SMAD4-205ENST00000588745 GSX1Q9H4S2 264 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-205ENST00000588745 SEPSECSQ9HD40 501 aaKnown RBP8.92□□□□□ -0.98
SMAD4-205ENST00000588745 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 LINC00527Q9UJ94 153 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 S4R3C0 116 aa8.92□□□□□ -0.98
SMAD4-205ENST00000588745 TRAV30A0A087WSZ9 112 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 LOC102723971A0A1B0GUV8 181 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 RBFOX3A6NFN3 312 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 F8W735 103 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-205ENST00000588745 H3BUA1 57 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 BRI3O95415 125 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 IFNA1P01562 189 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 IGKV1-17P01599 117 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 FABP1P07148 127 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 PMS2P11Q13670 270 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 PEA15Q15121 130 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 HAGHQ16775 308 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 C15orf32Q32M92 178 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 Q56UQ5 140 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TMEM86BQ8N661 226 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 NECAP1Q8NC96 275 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TMEM37Q8WXS4 190 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 NOL4LQ96MY1 436 aaPredicted RBP8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TXN2Q99757 166 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 MRPL32Q9BYC8 188 aaKnown RBP8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TMEM160Q9NX00 188 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 DOK5Q9P104 306 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 GNG13Q9P2W3 67 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 MYO9AB2RTY4 2548 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TLN2Q9Y4G6 2542 aa8.91□□□□□ -0.98
SMAD4-205ENST00000588745 TMEM218A2RU14 115 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 FAM223BA6NKX1 122 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 SCGB2A1O75556 95 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 TOMM40O96008 361 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 ARL14EPLP0DKL9 152 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 BCL2P10415 239 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 PPIFP30405 207 aaKnown RBP8.9□□□□□ -0.98
SMAD4-205ENST00000588745 PLP1P60201 277 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 CFHR3Q02985 330 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 FAM223AQ8IWN6 122 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 IQCF2Q8IXL9 164 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 ZNF502Q8TBZ5 544 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 NPFFR1Q9GZQ6 430 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 TMPRSS5Q9H3S3 457 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
SMAD4-205ENST00000588745 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-205ENST00000588745 CXorf1O96002 111 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 IGHV3-23P01764 117 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 SFTA3P0C7M3 94 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 PSG1P11464 419 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 PSMB3P49720 205 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 TAS2R45P59539 299 aa8.89□□□□□ -0.99
SMAD4-205ENST00000588745 YPEL3P61236 119 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms