RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 ANKRD34BA5PLL1 514 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 OR2T8A6NH00 312 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 CLN5O75503 358 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 CLEC3BP05452 202 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 CXCL2P19875 107 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 FGF7P21781 194 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-215ENST00000585741 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-215ENST00000585741 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 BSCL2Q96G97 398 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-215ENST00000585741 ATP6V0BQ99437 205 aa13.12□□□□□ -0.31
HMG20B-215ENST00000585741 A0A1W2PRX2 142 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 BCL2L11O43521 198 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 LGALS1P09382 135 aaKnown RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 OR10J1P30954 320 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 ARL3P36405 182 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 EIF5AP63241 154 aaKnown RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 ZNF343Q6P1L6 599 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 ZNF709Q8N972 641 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
HMG20B-215ENST00000585741 CITED2Q99967 270 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 PEF1Q9UBV8 284 aaKnown RBP13.11□□□□□ -0.31
HMG20B-215ENST00000585741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
HMG20B-215ENST00000585741 C17orf112F2Z3M2 114 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 JTBO76095 146 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 FCGR2BP31994 310 aaPredicted RBP13.1□□□□□ -0.31
HMG20B-215ENST00000585741 LGALSLQ3ZCW2 172 aaPredicted RBP13.1□□□□□ -0.31
HMG20B-215ENST00000585741 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 SPSB3Q6PJ21 355 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 BTNL8Q6UX41 500 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 MYOZ3Q8TDC0 251 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 DPF1Q92782 380 aa13.1□□□□□ -0.31
HMG20B-215ENST00000585741 PRKDCP78527 4128 aaKnown RBP13.1□□□□□ -0.31
HMG20B-215ENST00000585741 TGOLN2O43493 480 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 MPDU1O75352 247 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 RELQ04864 619 aaPredicted RBP13.09□□□□□ -0.31
HMG20B-215ENST00000585741 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 NSUN5P1Q3KNT7 163 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
HMG20B-215ENST00000585741 CAMLGP49069 296 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 KIAA0141Q14154 515 aaPredicted RBP13.08□□□□□ -0.32
HMG20B-215ENST00000585741 OPCMLQ14982 345 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 TIGITQ495A1 244 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 NDUFA11Q86Y39 141 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 TRGV9Q99603 122 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 WDR61Q9GZS3 305 aaKnown RBP13.08□□□□□ -0.32
HMG20B-215ENST00000585741 WFDC1Q9HC57 220 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
HMG20B-215ENST00000585741 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 VWFP04275 2813 aa13.08□□□□□ -0.32
HMG20B-215ENST00000585741 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
HMG20B-215ENST00000585741 HSPB1P04792 205 aaKnown RBP13.07□□□□□ -0.32
HMG20B-215ENST00000585741 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 RPEL1Q2QD12 228 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 RPL7L1Q6DKI1 246 aaKnown RBP13.07□□□□□ -0.32
HMG20B-215ENST00000585741 THAP8Q8NA92 274 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 HSD17B11Q8NBQ5 300 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 Q8WTZ3 238 aa13.07□□□□□ -0.32
HMG20B-215ENST00000585741 LINC01619G3V211 115 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 AGPAT2O15120 278 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 YIF1AO95070 293 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 TPT1P13693 172 aaKnown RBP13.06□□□□□ -0.32
HMG20B-215ENST00000585741 ZP3P21754 424 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 SELENOTP62341 195 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 CYP2G1PQ6ZSU1 146 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
HMG20B-215ENST00000585741 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
HMG20B-215ENST00000585741 I3L521 148 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 CTSGP08311 255 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 KRTAP10-3P60369 221 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 YPEL3P61236 119 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-215ENST00000585741 RUNX1Q01196 453 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 FAM106AQ4KMX7 169 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 C18orf65Q6ZTR6 163 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 GNPNAT1Q96EK6 184 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-215ENST00000585741 CHRDL1Q9BU40 450 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
HMG20B-215ENST00000585741 IGHV4OR15-8A0A075B7B6 117 aa13.04□□□□□ -0.32
HMG20B-215ENST00000585741 A0A087WW49 117 aa13.04□□□□□ -0.32
HMG20B-215ENST00000585741 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms